Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq10 174 2e-37 seq2 93.3 6e-13 >seq10 Length=610536 Score = 174 bits (192), Expect = 2e-37 Identities = 221/299 (74%), Gaps = 5/299 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||||||||| || |||||||||||||| | || | Sbjct 110709 GATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATC 110651 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | ||||| ||| ||| ||||||||||||| | |||||| Sbjct 110650 TTTCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCT 110591 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| || || ||| ||| ||||||||| || ||||||||| | || Sbjct 110590 CCCACGTTCTCGCGTTCTT-CGCTGCCTCCGATGGCATTGTCAACGAGAACCTCGTCGAG 110532 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | |||||||| | || ||||| |||| || ||||| ||||||||| Sbjct 110531 CGCTTCAGCGGCGAGGTCCAGGTCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATG 110472 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||||||||| || |||||||| ||||| ||||| |||||| ||||||| || Sbjct 110471 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATCGATACCTACATCAAGGAACC 110413 Score = 120 bits (132), Expect = 4e-21 Identities = 185/259 (71%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||||||||||||||||| || ||| | ||||| | | || | ||||| || Sbjct 110045 ATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCTGTGCT 109986 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| | | ||| |||||||||||||| || || ||||| ||||||| Sbjct 109985 CTGCTGGGCATGAACTCTAA-GCTGATGTGCCAGTACATCGAGTTC-GTCGCGGACCGCC 109928 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 || | | ||| || ||| | ||||| ||||| | | ||||| ||| | ||| Sbjct 109927 TGTTGGTGGCCCTTGGCAACA-AGAAGTACTACAACGCCACGAACCCCTTCGACTTCATG 109869 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||||||| | ||| ||||||||||| || ||| || || || || ||| Sbjct 109868 GAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTTGAGAAGCGGGTGGGTGACTACCAG 109809 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 109808 AAGGCTGGTGTCATGGCCA 109790 Score = 89.7 bits (98), Expect = 7e-12 Identities = 117/157 (75%), Gaps = 9/157 (6%) Strand=Plus/Minus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 || |||||||| ||||| || ||||||||| | | |||| || || ||| || ||| Sbjct 110306 AAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGAC-AGGGAATCTAC-CTTCGCTCAGC 110249 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGC---CA 1456238 | ||||| | || || || || ||||| || || ||||| || || || ||| || Sbjct 110248 GTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGG---TTCCTTCGCTTCCA 110192 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||| |||||||||||||| || |||||||| ||||| Sbjct 110191 TCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCT 110155 >seq2 Length=4967832 Score = 93.3 bits (102), Expect = 6e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827 |||||||| ||||| |||||||||||| |||||| ||||| ||| |||| |||| ||| Sbjct 2734664 GGCGCCGTTGGTGCTCGCACCACCGAGTCCCAGGTCCACCGTGAGCTGGCTTCGGGTCTG 2734723 Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGC 165863 | | ||| |||| ||||| ||| ||||||||||| Sbjct 2734724 TCCTTCCCCGTTGGTTTCAAGAACGGCACCGACGGC 2734759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177807824185670