Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq5 132 4e-26 seq2 87.8 2e-12 >seq5 Length=3972810 Score = 132 bits (146), Expect = 4e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| |||| |||||| || | || |||||||||||||| ||||| Sbjct 3010508 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAG 3010567 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||||| |||| || |||||||| ||||| ||| | | Sbjct 3010568 ATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTA 3010627 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| ||||| || |||| |||||||| || ||||| | ||| || || Sbjct 3010628 TCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACG 3010687 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 3010688 AAGATCTGCAT 3010698 Score = 111 bits (122), Expect = 1e-19 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||||||||| | | | |||||| || | || |||||||| || |||||||| ||| Sbjct 3010241 TTTCCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 3010300 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | | || || | || |||||||||||||| || || || | |||||||| |||| Sbjct 3010301 GAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGG 3010360 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGAT 35683 |||| || |||||| || |||||| | ||| | | | | || || |||| Sbjct 3010361 GGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTC--- 3010417 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| | ||| ||||| || || || | || ||||| || |||||||| Sbjct 3010418 TCCACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 100 bits (110), Expect = 3e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| || | || ||||||||||| || || || Sbjct 3011037 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAA 3011096 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||| | || |||||||||| |||||| ||| | || Sbjct 3011097 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT-AACGT 3011155 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | || |||||||| || ||||| | ||||| || || || || Sbjct 3011156 TGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 3011204 Score = 98.7 bits (108), Expect = 9e-16 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || | || ||| || | || ||||||||||| ||||| || Sbjct 3010736 TCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAG 3010795 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | ||| | || |||||||||| ||||| ||||| | | Sbjct 3010796 ATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTG 3010855 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | ||||| || |||||||| | ||||| || || || |||| Sbjct 3010856 TCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCA 3010904 >seq2 Length=4967832 Score = 87.8 bits (96), Expect = 2e-12 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || ||||||||||| || || | Sbjct 3524091 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3524032 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 | | |||||||| |||| || | | |||||||||| |||||| ||| | |||| Sbjct 3524031 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 3523973 Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||||||||| || || || | || || || |||||||| Sbjct 3523972 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGT 3523926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793402777800