Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5 127 3e-24 seq10 100 4e-16 >seq5 Length=3972810 Score = 127 bits (140), Expect = 3e-24 Identities = 477/744 (64%), Gaps = 8/744 (1%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||| || || || | |||||| |||| ||||| ||| || || || | || | | Sbjct 1661153 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTC 1661212 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | ||| ||| || ||||| || ||||| || |||| || || || Sbjct 1661213 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 1661272 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | | ||| || || || || || || ||||| || ||||| | Sbjct 1661273 AGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAG 1661332 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 | ||| || ||||| || || || || || || | | || || || || || || ||| Sbjct 1661333 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCC 1661392 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | ||||||||||||||| || |||| | ||||| |||| || ||| || || Sbjct 1661393 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 1661452 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 |||| || || ||| ||| || || | | || || | ||||| Sbjct 1661453 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCG 1661512 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || ||| | || ||||| | ||| || |||| ||||| || ||||| || Sbjct 1661513 ATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCA 1661572 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 ||||| || || |||||| | || || || | | || | || ||| || Sbjct 1661573 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCA 1661632 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || || || | || || || ||||||||||| | || | ||| | || ||||| || Sbjct 1661633 GCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTC 1661692 Query 70057 TCAATAGCTGATTCTATATCCCACTG--ATGAATTCCTATCGCGACACGCATCAACATAT 70114 || || || |||| || | ||| || || || | || |||||||||| || | Sbjct 1661693 TCGATGGC--CTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGT 1661750 Query 70115 GCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTT 70174 |||| || || || || || || || ||||||||| || |||| ||| | Sbjct 1661751 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCT 1661810 Query 70175 TAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTT 70232 | || || || ||||||| ||||| || | ||||| | |||| | || || |||| Sbjct 1661811 TGAAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTC 1661868 Query 70233 ATCCTTATATTTGGTAACTATATC 70256 ||| || ||| ||| ||| || Sbjct 1661869 ATCGGCATGTTTCATAATTATTTC 1661892 >seq10 Length=610536 Score = 100 bits (110), Expect = 4e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | |||||||||||| || || |||||||| | | || | ||||| || Sbjct 110089 AACAACAGGCAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAG 110148 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || |||||||| ||||||||||| |||||||| || |||| ||| || || || Sbjct 110149 AAGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 110208 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || ||||| || || || || || || || ||||| || Sbjct 110209 GAGAAGAAAATACCCTCCACGGCAGCGAAAGCAACGAG 110246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908499477400