Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 seq2 89.7 4e-13 >seq5 Length=3972810 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||| | | || | ||||| ||||| ||||| ||| || Sbjct 3010280 TCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAA 3010339 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||||||||| |||||||| || | ||||| ||||| ||||||||| || | | | Sbjct 3010340 ATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTA 3010399 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||| || | | || || ||||| || || | ||||| || || || ||||| Sbjct 3010400 TCAATAGTATCCGAGCTCTCCACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACG 3010459 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 3010460 AAGATCTGCATA 3010471 >seq2 Length=4967832 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || ||||||||||||| | |||| | || || ||||| ||||| ||| | || Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 |||||||| |||||||| || | |||||| || || ||||||| | || | | | || Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3523970 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238 | ||||| | | || || || || || || | || ||||| || || || || || Sbjct 3523969 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 3523911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934218738920