Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 138 1e-27 seq10 98.7 1e-15 >seq5 Length=3972810 Score = 138 bits (152), Expect = 1e-27 Identities = 564/890 (63%), Gaps = 62/890 (7%) Strand=Plus/Plus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 || || ||||| ||||||| | | ||||||| | || || || || | |||||| Sbjct 1660873 TTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAG 1660932 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370 || || || || | ||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct 1660933 CTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGC 1660992 Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATC--GGC- 111426 ||| |||| | || ||||| ||||| | | |||||||| | ||| | | || ||| Sbjct 1660993 ATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGAATAGCGTACCACAGCTTCTGGGCC 1661052 Query 111427 -GGCTGGTACAATGGCGTTGGCC--------CGTCCCT---------------------- 111455 | |||||| | ||| |||| | | ||| Sbjct 1661053 TTGATGGTACGACGGCCACGGCCTTCCTTCTCATACCTACAATACTGTTAGCACGAGTCG 1661112 Query 111456 ------------CCGCC--TCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC 111501 ||| | | ||||| |||||| || || ||||| ||||| | Sbjct 1661113 ACGATACACAACCCGACAAACTTACTTCTCGTAGAGAGCGTCGAACTCGTCACCGTAGAC 1661172 Query 111502 GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAAC 111561 || | | || || || | || || ||||| || | ||| | ||| ||||||| Sbjct 1661173 ATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTCCAGTCACCGTTCGCCTCAAC 1661232 Query 111562 CCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCT 111620 ||||||||||| || || || ||||||||| | || ||||| | | | | || ||| Sbjct 1661233 ACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAACAGATCACGAGCTCTGA-CCT 1661291 Query 111621 CTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCT 111680 | || | ||| ||||| || | || |||||||| | || ||||| |||||| |||| Sbjct 1661292 CCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAGACATCCGAGTGCCAGGGCT 1661351 Query 111681 CAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCG 111734 |||| |||| |||| || | ||||| ||| | || | || || | | Sbjct 1661352 CAAGGTAGATGGCGA---ATGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGG 1661408 Query 111735 CTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCC 111794 | ||| ||| || || |||||||| |||| || ||| | || ||| || || || | Sbjct 1661409 CAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAGGTACCGTTGGTACCAC 1661468 Query 111795 GAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACT 111854 ||| || | | | | | || | || || || ||||| || ||| || Sbjct 1661469 CAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCGATACCACCGGCCGTCT 1661528 Query 111855 TTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 111914 | ||||| || || | | ||||| | |||||||||| || ||||||||| Sbjct 1661529 TGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCA 1661588 Query 111915 TGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTG 111974 || ||| ||||||||| || | ||| || || |||||||| ||||| || || | Sbjct 1661589 TGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCG 1661648 Query 111975 GTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCA 112033 | | |||||| |||| ||| | || |||||| || ||| ||||| | | | ||| Sbjct 1661649 GGGAGGCGTGAGTGAA-GTACTTCTGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCA 1661707 Query 112034 ATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||||| |||||||| || | || || ||||| | || || ||| || Sbjct 1661708 ATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGTGCTGGGG 1661757 >seq10 Length=610536 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| ||||||||||| || || || || || || |||||| ||||| ||||||||||| Sbjct 110112 GTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGACC 110171 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | ||| || ||||||||||| ||||||||||| Sbjct 110172 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCCACGGC 110231 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG-AGCGAGACTTTGCATCAAACCATTTCATTG 122848 || || |||| || || | ||||||| || || | | | | ||| || || | Sbjct 110232 AGCGAAAGCAACGAGACGCTGAGCGAAGGTAGATTCCCTGT-CCTGGATCCACTTGATGG 110290 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | |||||||| |||| || || || Sbjct 110291 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 110321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031725236000