Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 145 9e-30 seq10 141 1e-28 seq3 86.0 8e-12 >seq5 Length=3972810 Score = 145 bits (160), Expect = 9e-30 Identities = 411/626 (66%), Gaps = 9/626 (1%) Strand=Plus/Plus Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997 ||||| |||||| || || ||||| ||||| | | || | | || || || | Sbjct 1661135 TACTTCTCGTAGAGAGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 1661194 Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057 | |||||||| || | ||| | ||| | ||||||| ||||||||||| || || ||| Sbjct 1661195 TTGGGGCAGAACAGGGTCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGG 1661254 Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117 |||| || || |||| ||||| ||| | | || || | || || || ||| Sbjct 1661255 GTCCACAGGGCGTAGAACAGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGG 1661314 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | |||| || || | || ||||| |||||| || || ||||| | |||| || || Sbjct 1661315 AGATCCAGGAACTCAAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCG 1661374 Query 119178 TTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234 ||| ||| |||||| || || || |||||| ||| || ||||||||||| Sbjct 1661375 GGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATA 1661434 Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGA 119292 |||| | ||| | ||| || || || || | ||| | ||| | | | | | || Sbjct 1661435 GGAACAAGACCGTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCC--AGTAGAACGGA 1661492 Query 119293 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGA 119352 ||| | || || ||| ||||| || ||| ||| ||||| ||||| | | | Sbjct 1661493 TGCGGTGCACGTTCAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCA 1661552 Query 119353 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 119412 || || ||||||| || || || ||| |||| | ||| ||||||||| | | Sbjct 1661553 GAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGA 1661612 Query 119413 TTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT- 119471 || ||| ||| |||||||||||||| ||||| || | ||||| |||| ||| | Sbjct 1661613 GCTGGGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTC 1661671 Query 119472 TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATC 119531 || |||||| || ||||||||| | | | |||||| ||||| ||||| | Sbjct 1661672 TGAGACATCAAGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACG 1661731 Query 119532 GAGACCCGCATAAACATGTATTGGGG 119557 | || ||||| | || || ||||| Sbjct 1661732 GCAACACGCATCAGCAGGTGCTGGGG 1661757 Score = 114 bits (126), Expect = 2e-20 Identities = 461/718 (64%), Gaps = 16/718 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 1660330 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 1660389 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || ||||||||||| || | || | |||||| |||| ||| | | || || Sbjct 1660390 GCAGTGGGCATGGGAGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTAGCC 1660449 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 ||||||| ||||||||| || | | | | | |||||| || |||| ||| Sbjct 1660450 TTGAGAGAGTCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 1660509 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421 ||||| ||||| | || ||||||||| | ||||| || | ||| ||| || | Sbjct 1660510 ATACCCTGGGAGACAGGAGATCCCTCATAGGTCTCGTAAGTGCCGAACTCCTTGGCAAGA 1660569 Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGC 118480 ||||| || | | ||||| || || || || || || | |||| || Sbjct 1660570 TCGGACGAGGCGGTCAAACCAGCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTGT 1660629 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTT 118539 || ||||||| | || || || | || || || | | || |||| || ||||| | Sbjct 1660630 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCG-CAGAGCGAGGAAAGCATCAGCCAGACCGT 1660687 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGG 118596 |||||| || |||| || || || | | || |||||| || |||| |||| Sbjct 1660688 TGACACCCAGAGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGG 1660744 Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCAT 118656 | || | || | ||||| | | | || || || | | |||| | || | Sbjct 1660745 GGTAGTAGTTGATGTCGATGATCTTGTTCAGGTTACGGACCAAGACCTGGACAACCTCGT 1660804 Query 118657 GAAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 118713 | ||||| | | ||| | | ||||| | || ||| | |||| || || | Sbjct 1660805 GGAGCTTGCCAAAGTCATACTCGCCGCGAGCAGCGTC---GACGAAAGTAGGCAGAGCAA 1660861 Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773 ||||| || ||||| |||| ||||||| | || ||||||| || || || |||| Sbjct 1660862 GGGACGCAAGGTTACAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGC 1660921 Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 118833 | | ||| || || ||||| || | |||||| || || ||| |||| || |||| Sbjct 1660922 AGAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCAT 1660981 Query 118834 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 ||||||| |||||| | || | || ||||| || |||| || |||||||| | ||| Sbjct 1660982 CCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCCAGAATAGCGTACCA 1661039 >seq10 Length=610536 Score = 141 bits (156), Expect = 1e-28 Identities = 305/452 (67%), Gaps = 8/452 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || ||||||||||| |||||||| ||||| || ||| ||| |||||| Sbjct 109813 TAGTCACCCACCCGCTTCTCAAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATG 109872 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || |||||| | | ||| | | | || | |||| | || || Sbjct 109873 AAGTCGAAGGGGTTCGTGGCGTTGTAGTACTTCTTGTTG-CCAAGGGCCACCAACAGGCG 109931 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 |||| |||| |||| ||||||| ||||| || |||||||| || | || ||| Sbjct 109932 GTCCGCGACGAACTCGATGTACTGGCACATCAGCTTAGAGTTCATGCCCAGCAGAGCACA 109991 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || ||||| | |||| ||| ||||||| | || || || | |||| | | Sbjct 109992 GGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGTCCTC 110051 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAAACTC 130023 || || | ||| || | ||| || | | ||| || | || || || Sbjct 110052 AACAACCTGCTTGCTGGGGCGGTTGTTCAGG---TGGGAGAACAACAGGCAGGCGAAGTC 110108 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||| ||||| |||||||| || || |||||| |||||| |||||||| Sbjct 110109 GGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAG 110168 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | |||||| || | | || || || |||||||| || |||||||| Sbjct 110169 ACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAAATACCCTCCAC 110228 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| |||||||| ||| |||| Sbjct 110229 GGCAGCGAAAGCAACGAGACGCTGAGCGAAGG 110260 >seq3 Length=4809046 Score = 86.0 bits (94), Expect = 8e-12 Identities = 194/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 179776 AGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAG 179835 || ||||| ||||| ||| |||| |||| ||| ||||| ||||| | | || || Sbjct 3585273 AGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTCATGATCATCAAGTGGCCGTAC 3585214 Query 179836 CGAAGCTCGGAAACATCTTGATAATCCTTACCTTGT--TGAAGACCCAAGATCTTCTTGA 179893 ||||| || || ||| ||||| ||||| || |||||||||| ||||||| Sbjct 3585213 CGAAGGCCGCGGGTGTCAGTATACTCCTT--CTTGTGCTGCAGACCCAAGAAGTTCTTGA 3585156 Query 179894 GATCATTGAACT-CTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTA 179952 || ||||| | | ||||| | || || | | |||||||| ||||| || Sbjct 3585155 TATT-TTGAATTTCCTGGTTCTTCGAGATCTGGTCGAAAGAAGCATCACGGACGTTGAGC 3585097 Query 179953 CACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCA 180012 | || || || || |||||||||||| | |||| ||||||| || | ||||||| Sbjct 3585096 AATTTTCCTCGAAGCGGGAACACACCGAAAAGATCCGGACCAACAACCGCTCGACCAGCC 3585037 Query 180013 ACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA 180059 | || || ||| || || ||||| || |||| ||| || || || Sbjct 3585036 ATGGCCAGACCCTTGGCCGAGTCACCTTCTGTCAGGATCAGGGTGCA 3584990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434929434600