Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq10 138 1e-27
seq3 102 1e-16
>seq10
Length=610536
Score = 138 bits (152), Expect = 1e-27
Identities = 160/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791
|||| || || ||| ||||| || |||||||| || |||||| | | ||| |
Sbjct 110323 CAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAAT 110264
Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851
| | |||| ||| |||| ||| | || || || || |||||||| |||||||| |||
Sbjct 110263 C-TACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110205
Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911
|||||| | || | |||||||||||||| ||||||||||| ||||| |||||||
Sbjct 110204 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110145
Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||||| ||||||||||| ||||| || |||
Sbjct 110144 AACGAGCTCATCTCTCGTGATGAGGGTCTGCAC 110112
>seq3
Length=4809046
Score = 102 bits (112), Expect = 1e-16
Identities = 195/285 (68%), Gaps = 2/285 (1%)
Strand=Plus/Minus
Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228
|| ||||||||||| |||||||| ||| ||| ||||||||||| | | || |||
Sbjct 3585273 AGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTCATGATCATCAAGTGGCCGTAC 3585214
Query 169229 CGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 169288
||||| || || ||| ||||| || || |||||||||| ||||||| |
Sbjct 3585213 CGAAGGCCGCGGGTGTCAGTATACTCCTTCTTGTGCTGCAGACCCAAGAAGTTCTTGATA 3585154
Query 169289 TCGTTGAACT-CTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACA 169347
| ||||| | | ||||| | || ||| || ||| ||||| || || || |
Sbjct 3585153 TT-TTGAATTTCCTGGTTCTTCGAGATCTGGTCGAAAGAAGCATCACGGACGTTGAGCAA 3585095
Query 169348 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407
|| || ||||| ||||| |||||| | |||| ||||||| || | |||| || |
Sbjct 3585094 TTTTCCTCGAAGCGGGAACACACCGAAAAGATCCGGACCAACAACCGCTCGACCAGCCAT 3585035
Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452
|| ||| ||| ||||||||||| || || | ||| || || ||
Sbjct 3585034 GGCCAGACCCTTGGCCGAGTCACCTTCTGTCAGGATCAGGGTGCA 3584990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260544823400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |