Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq10 138 1e-27 seq3 102 1e-16 >seq10 Length=610536 Score = 138 bits (152), Expect = 1e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791 |||| || || ||| ||||| || |||||||| || |||||| | | ||| | Sbjct 110323 CAGTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAAT 110264 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | | |||| ||| |||| ||| | || || || || |||||||| |||||||| ||| Sbjct 110263 C-TACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGT 110205 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||||| | || | |||||||||||||| ||||||||||| ||||| ||||||| Sbjct 110204 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCC 110145 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| ||||||||||| ||||| || ||| Sbjct 110144 AACGAGCTCATCTCTCGTGATGAGGGTCTGCAC 110112 >seq3 Length=4809046 Score = 102 bits (112), Expect = 1e-16 Identities = 195/285 (68%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 || ||||||||||| |||||||| ||| ||| ||||||||||| | | || ||| Sbjct 3585273 AGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTCATGATCATCAAGTGGCCGTAC 3585214 Query 169229 CGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGA 169288 ||||| || || ||| ||||| || || |||||||||| ||||||| | Sbjct 3585213 CGAAGGCCGCGGGTGTCAGTATACTCCTTCTTGTGCTGCAGACCCAAGAAGTTCTTGATA 3585154 Query 169289 TCGTTGAACT-CTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACA 169347 | ||||| | | ||||| | || ||| || ||| ||||| || || || | Sbjct 3585153 TT-TTGAATTTCCTGGTTCTTCGAGATCTGGTCGAAAGAAGCATCACGGACGTTGAGCAA 3585095 Query 169348 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407 || || ||||| ||||| |||||| | |||| ||||||| || | |||| || | Sbjct 3585094 TTTTCCTCGAAGCGGGAACACACCGAAAAGATCCGGACCAACAACCGCTCGACCAGCCAT 3585035 Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 || ||| ||| ||||||||||| || || | ||| || || || Sbjct 3585034 GGCCAGACCCTTGGCCGAGTCACCTTCTGTCAGGATCAGGGTGCA 3584990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260544823400