Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 217 2e-51
seq3 100 3e-16
>seq5
Length=3972810
Score = 217 bits (240), Expect = 2e-51
Identities = 407/591 (69%), Gaps = 8/591 (1%)
Strand=Plus/Minus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| || ||| | ||||||||||| |||| | | | ||||| ||| ||
Sbjct 1661742 ATGCGTGTTGCCGTTGGTATCCACGGCAGCGACATTGAGAAGGCCATCGAGACCTACAAC 1661683
Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314
|| ||| || |||||||| || |||||| | || || |||||||||||||||||
Sbjct 1661682 TTGATGTCTCAGAAGTACTTCACTCACGCCTCCCCGACTCTGTTCAACGCTGGTACTCCC 1661623
Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374
|| || ||| | | |||||||| || | |||||||| ||| || ||||| |||
Sbjct 1661622 CAGCCCCAGCTCGCCTCTTGCTTCCTCGTCGACATGAAGGAGGACAGCATTGACGGTATC 1661563
Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434
||||| || || ||| || || ||||||||| | | |||||||||||| | ||
Sbjct 1661562 TACGACACTCTGAAGACCTGCGCTATGATCTCCAAGACGGCCGGTGGTATCGGTCTGAAC 1661503
Query 53435 -TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGG 53493
||| | | ||||| | | ||| | || || || ||||| | || | ||
Sbjct 1661502 GTGCACCG-CATCCGTTCTACTGGCTCCTACATTGGTGGTACCAACGGTACCTCCAACGG 1661444
Query 53494 AATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGG 53553
| || |||||||| || |||||||||||||| ||| | ||||| ||||||||||
Sbjct 1661443 TCTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCCAGATACGTTGACCAGGGTGGCAA 1661384
Query 53554 GAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTT 53613
||||| || | |||||||||||||| ||||| |||||| | || | | |||||
Sbjct 1661383 CAAGCGTCCCGGTGCATTCGCCATCTACCTTGAGCCCTGGCACTCGGATGTCTTTGAGTT 1661324
Query 53614 TCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTT-TAC 53670
|| || || ||| ||| || ||| | || ||| | | ||| ||||| ||||| |||
Sbjct 1661323 CCTGGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCAGAGCT--CGTGATCTGTTCTAC 1661266
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
|| ||||||| ||||| || |||||| | || ||| | ||| || ||| |||
Sbjct 1661265 -GCCCTGTGGACCCCGGATCTGTTCATGAAGCGTGTTGAGGCGAACGGTGACTGGACCCT 1661207
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
| | ||||| ||||| ||| ||| | | |||||||||||| |||||
Sbjct 1661206 GTTCTGCCCCAACGAAGCCCCTGGCTTGGCTGATGTCTACGGTGACGAGTT 1661156
Score = 131 bits (144), Expect = 2e-25
Identities = 303/448 (68%), Gaps = 13/448 (3%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||| | |||| || || || ||||| || || || ||||||| ||||| |
Sbjct 1660424 CGCAACAGCTTGCTGGTCGCTCCCATGCCCACTGCCAGTACCAGTCAGATCTTGGGCTTC 1660365
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| ||||||||||| ||||| | | || ||||||
Sbjct 1660364 AACGAGTGCTTCGAGCCTTACACCTCCAACATCTACTCCCGCCGTGTCTTGGCTGGTGAG 1660305
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| || ||||| || | ||||||||| | || | ||||
Sbjct 1660304 TTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTGGTTGACCTCGGCCTGTGGTCGGAC 1660245
Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCC 55719
| || |||| || || | ||| || || || ||||||||||| || | |||
Sbjct 1660244 AACATGAAGAACCGCATCAT-TGCCGAG-GGTGGTTCCGTCCAGAACATCCCCAACATCC 1660187
Query 55720 TCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGAT-TCC--ACAGAAGAGTCTGA 55775
| | | | |||||| | | ||| ||||||||||||||| ||| | || || ||||
Sbjct 1660186 CCAGTGACATCAAGGCGCTGTACAAGACGGTGTGGGAGATCTCCCAGCGGACGATTCTG- 1660128
Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835
| ||| ||| || |||||||||| ||| |||||||| ||||| || |||||| |
Sbjct 1660127 --CAGATGGCTGCGGACCGTGGTGCGTTCATTGACCAGTCTCAGTCCCTCAACATCCACC 1660070
Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895
|| || | || | ||| |||| | | | ||||||||| ||| ||||||| |||
Sbjct 1660069 TGAAGGAGCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGATGGGTT 1660010
Query 55896 TCAAGACGGGTATGTACTATCTGCGGAC 55923
| |||||||| |||||||| ||||| ||
Sbjct 1660009 TGAAGACGGGCATGTACTACCTGCGCAC 1659982
>seq3
Length=4809046
Score = 100 bits (110), Expect = 3e-16
Identities = 140/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 118998 CAACCTTGCTCATGTTGTCGGTCCAAGATTGCATGTAGATCTTCTT-----ACCATCACT 119052
||| |||| |||||||||| ||||| | ||| |||| ||||||| || | ||
Sbjct 3584225 CAATCTTGGTCATGTTGTCCGTCCATGTCTGCTTGTACTTCTTCTTCTGAGACGAGTCCT 3584166
Query 119053 AATTTT-GATGTTAAATTTCGAACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCC 119111
| ||| |||| || | || ||| ||||| |||||||||||| | ||||| |
Sbjct 3584165 GAGTTTCGATGGAGAACTCCGTGGAGAAAACGTTACAGAGCTTGGCACCGAAACCGTTAC 3584106
Query 119112 GACCACCGGTCACGCGCTGCTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAA 119171
|||||||||| || ||||| | ||||| |||||||||| ||| | || || ||||
Sbjct 3584105 GACCACCGGTGACCTTCTGCTGCGTGTCGTCGTAGTTGGAGGAGGTGAGGAGATGACCAA 3584046
Query 119172 AGATGAGCTCGGGGA 119186
|||| || |||||||
Sbjct 3584045 AGATCAGTTCGGGGA 3584031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215760593000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |