Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 217 2e-51 seq3 100 3e-16 >seq5 Length=3972810 Score = 217 bits (240), Expect = 2e-51 Identities = 407/591 (69%), Gaps = 8/591 (1%) Strand=Plus/Minus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254 ||||| || ||| | ||||||||||| |||| | | | ||||| ||| || Sbjct 1661742 ATGCGTGTTGCCGTTGGTATCCACGGCAGCGACATTGAGAAGGCCATCGAGACCTACAAC 1661683 Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314 || ||| || |||||||| || |||||| | || || ||||||||||||||||| Sbjct 1661682 TTGATGTCTCAGAAGTACTTCACTCACGCCTCCCCGACTCTGTTCAACGCTGGTACTCCC 1661623 Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374 || || ||| | | |||||||| || | |||||||| ||| || ||||| ||| Sbjct 1661622 CAGCCCCAGCTCGCCTCTTGCTTCCTCGTCGACATGAAGGAGGACAGCATTGACGGTATC 1661563 Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434 ||||| || || ||| || || ||||||||| | | |||||||||||| | || Sbjct 1661562 TACGACACTCTGAAGACCTGCGCTATGATCTCCAAGACGGCCGGTGGTATCGGTCTGAAC 1661503 Query 53435 -TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGG 53493 ||| | | ||||| | | ||| | || || || ||||| | || | || Sbjct 1661502 GTGCACCG-CATCCGTTCTACTGGCTCCTACATTGGTGGTACCAACGGTACCTCCAACGG 1661444 Query 53494 AATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGG 53553 | || |||||||| || |||||||||||||| ||| | ||||| |||||||||| Sbjct 1661443 TCTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCCAGATACGTTGACCAGGGTGGCAA 1661384 Query 53554 GAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTT 53613 ||||| || | |||||||||||||| ||||| |||||| | || | | ||||| Sbjct 1661383 CAAGCGTCCCGGTGCATTCGCCATCTACCTTGAGCCCTGGCACTCGGATGTCTTTGAGTT 1661324 Query 53614 TCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCGTGACCTGTT-TAC 53670 || || || ||| ||| || ||| | || ||| | | ||| ||||| ||||| ||| Sbjct 1661323 CCTGGATCTCCGTAAGAACCACGGTAAGGAGGAGGTCAGAGCT--CGTGATCTGTTCTAC 1661266 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || ||||||| ||||| || |||||| | || ||| | ||| || ||| ||| Sbjct 1661265 -GCCCTGTGGACCCCGGATCTGTTCATGAAGCGTGTTGAGGCGAACGGTGACTGGACCCT 1661207 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 | | ||||| ||||| ||| ||| | | |||||||||||| ||||| Sbjct 1661206 GTTCTGCCCCAACGAAGCCCCTGGCTTGGCTGATGTCTACGGTGACGAGTT 1661156 Score = 131 bits (144), Expect = 2e-25 Identities = 303/448 (68%), Gaps = 13/448 (3%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||| | |||| || || || ||||| || || || ||||||| ||||| | Sbjct 1660424 CGCAACAGCTTGCTGGTCGCTCCCATGCCCACTGCCAGTACCAGTCAGATCTTGGGCTTC 1660365 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||| ||||| ||||||||||| ||||| | | || |||||| Sbjct 1660364 AACGAGTGCTTCGAGCCTTACACCTCCAACATCTACTCCCGCCGTGTCTTGGCTGGTGAG 1660305 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663 || || ||||| || | ||||||||| | || | |||| Sbjct 1660304 TTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTGGTTGACCTCGGCCTGTGGTCGGAC 1660245 Query 55664 CAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATTCC 55719 | || |||| || || | ||| || || || ||||||||||| || | ||| Sbjct 1660244 AACATGAAGAACCGCATCAT-TGCCGAG-GGTGGTTCCGTCCAGAACATCCCCAACATCC 1660187 Query 55720 TCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGAT-TCC--ACAGAAGAGTCTGA 55775 | | | | |||||| | | ||| ||||||||||||||| ||| | || || |||| Sbjct 1660186 CCAGTGACATCAAGGCGCTGTACAAGACGGTGTGGGAGATCTCCCAGCGGACGATTCTG- 1660128 Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835 | ||| ||| || |||||||||| ||| |||||||| ||||| || |||||| | Sbjct 1660127 --CAGATGGCTGCGGACCGTGGTGCGTTCATTGACCAGTCTCAGTCCCTCAACATCCACC 1660070 Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895 || || | || | ||| |||| | | | ||||||||| ||| ||||||| ||| Sbjct 1660069 TGAAGGAGCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAGATGGGTT 1660010 Query 55896 TCAAGACGGGTATGTACTATCTGCGGAC 55923 | |||||||| |||||||| ||||| || Sbjct 1660009 TGAAGACGGGCATGTACTACCTGCGCAC 1659982 >seq3 Length=4809046 Score = 100 bits (110), Expect = 3e-16 Identities = 140/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 118998 CAACCTTGCTCATGTTGTCGGTCCAAGATTGCATGTAGATCTTCTT-----ACCATCACT 119052 ||| |||| |||||||||| ||||| | ||| |||| ||||||| || | || Sbjct 3584225 CAATCTTGGTCATGTTGTCCGTCCATGTCTGCTTGTACTTCTTCTTCTGAGACGAGTCCT 3584166 Query 119053 AATTTT-GATGTTAAATTTCGAACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCC 119111 | ||| |||| || | || ||| ||||| |||||||||||| | ||||| | Sbjct 3584165 GAGTTTCGATGGAGAACTCCGTGGAGAAAACGTTACAGAGCTTGGCACCGAAACCGTTAC 3584106 Query 119112 GACCACCGGTCACGCGCTGCTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAA 119171 |||||||||| || ||||| | ||||| |||||||||| ||| | || || |||| Sbjct 3584105 GACCACCGGTGACCTTCTGCTGCGTGTCGTCGTAGTTGGAGGAGGTGAGGAGATGACCAA 3584046 Query 119172 AGATGAGCTCGGGGA 119186 |||| || ||||||| Sbjct 3584045 AGATCAGTTCGGGGA 3584031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215760593000