Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq5 199 5e-46 seq10 132 5e-26 seq2 123 3e-23 seq1 107 2e-18 >seq5 Length=3972810 Score = 199 bits (220), Expect = 5e-46 Identities = 173/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| |||||||| || |||||||| ||||| ||| | || | Sbjct 3010914 GTCAAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCGAC 3010855 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| ||||| | || ||||||||||||||||| || ||||| |||||||||||||| || Sbjct 3010854 AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCATC 3010795 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || || || ||||| || ||||||| |||||||| | ||||| || ||||||||||| Sbjct 3010794 TTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGGAA 3010735 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||| || ||| | |||||||| ||||| Sbjct 3010734 TCCACTCTTCACCTCGTCCTTCGTCTTCGTGGTGG 3010700 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| || ||||| || || | || ||||| || Sbjct 3010698 ATGCAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 3010639 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || ||||| |||||||| || ||||| || |||||| Sbjct 3010638 GACACCATCGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCAG 3010579 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || |||||||||||||| || ||||||| |||||| | | ||||| || Sbjct 3010578 CAGCGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACCTTGTCCGACTACAAC 3010519 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || ||||| || ||| | ||||| || ||||| Sbjct 3010518 ATTCAGAAGGAATCGACCCTTCACCTTGTCCTTCGTCTCCGTGGTGG 3010472 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 3011204 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGCGATACCATCGACAACGTTAAGACC 3011145 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 3011144 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCTGGAAAG 3011085 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| |||||||| | ||||| || |||| ||||| || ||||| || Sbjct 3011084 CAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTCTACTCTCCAC 3011025 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 3011024 CTCGTTCTCCGCCTGCGTGGTGG 3011002 Score = 143 bits (158), Expect = 3e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| ||||| || ||||| ||| || | Sbjct 3010470 ATGCAGATCTTCGTGAAGACACTCACCGGCAAGACGATTACGCTAGAGGTGGAG--AGCT 3010413 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| || | ||| || || || || |||||||| ||||| || || | Sbjct 3010412 CGGATACTATTGATAACGTCAAGAACAAGATCCAAGATAAGGAGGGCATTCCCCCGGATC 3010353 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| ||||| ||||||||||| || || |||| ||||| || | ||||| | Sbjct 3010352 AGCAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAAGATGGACGTACGCTCTCCGACTACA 3010293 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| |||||| || | || | ||||| || |||||| Sbjct 3010292 ACATCCAGAAGGAGAGCACTCTGCACTTGGTGCTCCGTCTCCGTGGTGGA 3010243 Score = 120 bits (132), Expect = 3e-22 Identities = 401/616 (65%), Gaps = 21/616 (3%) Strand=Plus/Plus Query 81146 CGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205 ||||||||| | |||||| | |||| | | | ||| ||||| ||||| | |||| Sbjct 1661151 CGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGG 1661210 Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265 |||||| || ||| ||| ||||||||| || ||| |||| |||||| || Sbjct 1661211 TCCAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGA 1661270 Query 81266 ACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTC 81323 |||| || || ||| | ||||||| | ||| ||||| || | || || || || Sbjct 1661271 ACAGATCACG--AGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTC 1661328 Query 81324 CATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG------ 81377 | || |||| ||||| ||||| || || | ||||| | || | |||| Sbjct 1661329 AAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACC---GGGACGCTTGTT 1661385 Query 81378 GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACC 81437 ||||||||||| ||||| | |||||| ||| || ||||| | |||||| | | ||| Sbjct 1661386 GCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACC 1661445 Query 81438 ATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATT 81495 | || |||||| ||||| | || || || | | || | | ||| || Sbjct 1661446 GTTGGAGGTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTT 1661505 Query 81496 GAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAA 81555 |||||||| ||||| | | ||| || ||| ||| || |||| || || || Sbjct 1661506 --CAGACCGATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAG 1661563 Query 81556 ATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTT 81615 || || || ||||| || | |||||||| | | ||| || | | ||| |||| | Sbjct 1661564 ATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTG-GGGC-T 1661621 Query 81616 TTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCA 81673 ||| || || |||||||| || |||| |||||| |||| || | ||||||| Sbjct 1661622 GGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCA 1661681 Query 81674 GGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCA 81733 || ||||| || || | ||| ||| ||||| ||||| | || ||||||| Sbjct 1661682 AGTTGTAGGTCTCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCA 1661741 Query 81734 TAAACATGTACTGGGG 81749 | | || || |||||| Sbjct 1661742 TCAGCAGGTGCTGGGG 1661757 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096 ||| ||||| ||||||||||||||||| | ||| ||||||||||| | |||||| Sbjct 1659981 CGTGCGCAGGTAGTACATGCCCGTCTTCAAACCCATCTTCCAGCCGGCAAAGTGCATGCT 1660040 Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 ||| ||| | | ||||| | || || | |||||| || ||||||||||| || Sbjct 1660041 GGTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAAT 1660100 Query 80157 GAAAGCCCCACGATCTGCCGCCAT 80180 ||| || ||||| || || ||||| Sbjct 1660101 GAACGCACCACGGTCCGCAGCCAT 1660124 >seq10 Length=610536 Score = 132 bits (146), Expect = 5e-26 Identities = 335/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || ||||||||| |||||| | | | | || | || | ||||||| Sbjct 110306 AAGAAGGCCGATTGGGCCATCAAGTGGATCCAGGACAGGGAATCTACCTTCGCTCAGCGT 110247 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| ||||| || ||||| || |||||||| || || || ||| ||| || ||| Sbjct 110246 CTCGTTGCTTTCGCTGCCGTGGAGGGTATTTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 110187 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || || ||||| |||||| | || || |||||||| |||||||| Sbjct 110186 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGT 110127 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGA-CAAA 64896 || ||||| || ||| || || || | || ||||| |||||| || | | Sbjct 110126 GATGAGGGTCTGCACACCGACTT--CGCCTGCCTGTTGTTCTCCCACCTGAACAACCGCC 110069 Query 64897 CCATCA--CATGGGACTATAATTGAT-ATAGTAAAATCGGCTGTAGAAATTGAAAAGGAA 64953 ||| || || || | | || || || | ||| || | ||||| |||| Sbjct 110068 CCAGCAAGCA-GGTTGTTGAGGACATCATCGTCGA---GGCCGTCGGCATTGAGCAGGAG 110013 Query 64954 TTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAG 65013 ||| | |||| ||| || || ||| ||| | |||||| | | | |||| ||| Sbjct 110012 TTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAACTCTAAGCTGATGTGCCAG 109953 Query 65014 TATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAAT 65073 || ||||| || || || || |||||| | |||| | ||| |||| || Sbjct 109952 TACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGGCAACAAGAAGTACTACAAC 109893 Query 65074 TCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTT 65133 | | || || || |||| |||||| ||||| |||| ||| ||||| ||||| ||| Sbjct 109892 GCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTT 109833 Query 65134 GAAAAGAGGGTAGGTGATTAC 65154 || ||| |||| ||||| ||| Sbjct 109832 GAGAAGCGGGTGGGTGACTAC 109812 >seq2 Length=4967832 Score = 123 bits (136), Expect = 3e-23 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 3523911 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 3523970 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || || ||||||||||| Sbjct 3523971 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCTT 3524030 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 3524031 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 3524089 Query 27594 GGAAT 27598 || || Sbjct 3524090 GGTAT 3524094 >seq1 Length=6182763 Score = 107 bits (118), Expect = 2e-18 Identities = 108/139 (78%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||| |||||||||| || || || |||||||||||||| || || ||||||||||| | Sbjct 4512518 TTCAG-ACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGC 4512460 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 ||||||| | ||||| || | ||||| || |||| ||||| ||||| || || || | Sbjct 4512459 TCGAGGACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGG 4512400 Query 27614 TCTTGCGTCTTCGCGGTGG 27632 | | || || || ||||| Sbjct 4512399 TGCTCCGCCTGCGTGGTGG 4512381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310150489200