Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 152 1e-31 seq2 98.7 2e-15 seq1 95.1 3e-14 >seq5 Length=3972810 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || ||||| || || | ||||| |||| ||| || | ||||| Sbjct 3010487 AGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCC 3010546 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | || || ||||| || ||||| |||||||||||| Sbjct 3010547 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCT 3010606 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||||||||| || | ||| || || || ||||||||| Sbjct 3010607 TGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTC 3010666 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | ||| || | ||| | ||||| Sbjct 3010667 TTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||| ||||||||||| ||||||| ||||| || | || || Sbjct 3010705 ACGAAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGT 3010764 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || |||||||| || || || Sbjct 3010765 ACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCC 3010824 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||||||| ||||| ||||| || | ||||| || | Sbjct 3010825 CTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAG 3010884 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 ||||| ||||| || |||| Sbjct 3010885 GGTGATAGTCTTTCCGGTCA 3010904 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||| || || |||| ||||| |||| | || | |||||| Sbjct 3010259 AGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGTCCATCT 3010318 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| || || || || || || || ||||| || ||||| ||| Sbjct 3010319 TCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCT 3010378 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| | ||| || || || || || ||| | ||||| |||| ||| |||||| Sbjct 3010379 TGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCCACCTCTAGCGTAATCGTC 3010438 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 3010439 TTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || || |||| ||||| || | || || | ||||| Sbjct 3011017 AGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 3011076 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || |||||||| || || || |||||||| Sbjct 3011077 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3011136 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || | || || || | ||||| ||| Sbjct 3011137 TGGATCTTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTC 3011196 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 3011197 TTGCCGGT 3011204 >seq2 Length=4967832 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| |||||||||||| Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || || || || || ||||| |||||||| |||||||| ||| || ||| Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3523970 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| | || ||||| | || || ||||| ||||| Sbjct 3523969 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGT 3523926 >seq1 Length=6182763 Score = 95.1 bits (104), Expect = 3e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| ||||| || | | ||| | || || Sbjct 4512396 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 4512455 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || |||||||| || ||||| ||||||||| Sbjct 4512456 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCT 4512515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530665224290