Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 >seq4 Length=4068578 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/188 (73%), Gaps = 10/188 (5%) Strand=Plus/Plus Query 53488 GAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGC 53547 |||| |||| |||||| | ||||||| ||| | || |||| || |||||||| || Sbjct 1005300 GAAGTTCGTGAAGGTGCGCATGAGGACGACCAAGATTCCCCAGATTGGAGACAAGTTCGC 1005359 Query 53548 ATC-CTTCACGGCGCAAAAGGGGACATGCGGAGCGGTC-CTGAC--TCAGGAGGACATGC 53603 || | |||||| |||||||| || ||| || || || |||||| ||||||| Sbjct 1005360 CTCTCGTCACGGA-CAAAAGGGTACCATCGGTA---TCACTTACCGTCAGGAAGACATGC 1005415 Query 53604 CCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCAACCCCCACGCCTTTCCCTCC 53662 | ||| ||| || ||| ||||| ||| | ||||||||||| |||||| |||||||| Sbjct 1005416 CTTTCACTCGGGAGGGTGTG-TGCCCTGACTTGATCATCAACCCTCACGCCATTCCCTCC 1005474 Query 53663 AGGATGAC 53670 | ||||| Sbjct 1005475 CGTATGAC 1005482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163026746010