Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 161 1e-34 >seq5 Length=3972810 Score = 161 bits (178), Expect = 1e-34 Identities = 579/898 (64%), Gaps = 8/898 (1%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 || || || || || | |||||| |||| |||||| ||| || ||||| | || | | Sbjct 1661153 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGGGTC 1661212 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 |||||||| | ||| ||| || ||||| || ||||| || |||| || || || Sbjct 1661213 CAGTCACCGTTCGCCTCAACACGCTTCATGAACAGATCCGGGGTCCACAGGGCGTAGAAC 1661272 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 ||||| || | ||| || || || || ||||| ||||| || ||||| | Sbjct 1661273 AGATCACGAGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGATCCAGGAACTCAAAG 1661332 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | ||| || ||||| || || || || || || | | || || || || || || ||| Sbjct 1661333 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCGAATGCACCGGGACGCTTGTTGCCACCC 1661392 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 || || | |||||||| ||||| || | || | | ||| |||| || |||||| || Sbjct 1661393 TGGTCAACGTATCTGGCAGTGTTGTTGAAGACACGAAGCATAGGAACAAGACCGTTGGAG 1661452 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 || || || || ||| ||| || ||| | | || || | | | || Sbjct 1661453 GTACCGTTGGTACCACCAATGTAGGAGCCAGTAGAACGGATGCGGTGCACGTTCAGACCG 1661512 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || || || ||| |||| || || | |||||| |||| || ||||||||||| || Sbjct 1661513 ATACCACCGGCCGTCTTGGAGATCATAGCGCAGGTCTTCAGAGTGTCGTAGATACCGTCA 1661572 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 || ||||| ||| |||||| | || || || | | || | || ||| || Sbjct 1661573 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCGAGCTGGGGCTGGGGAGTACCA 1661632 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 || || || | ||||| || || || || || | || | ||| | | ||||| || Sbjct 1661633 GCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGAGACATCAAGTTGTAGGTC 1661692 Query 78465 TCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGC 78524 || || || || ||||| | || || || || || |||||||||| || ||| Sbjct 1661693 TCGATGGCCTTCTCAATGTCGCTGCCGTGGATACCAACGGCAACACGCATCAGCAGGTGC 1661752 Query 78525 TGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 78584 || || | ||| || ||| || || ||||| ||| || |||||||| || Sbjct 1661753 TGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTAGGACCGCTCCAAAGTCTTG 1661812 Query 78585 AAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT 78642 ||||| || ||||||| ||||| || | ||||| | |||| | || || |||| || Sbjct 1661813 AAACCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTGAGTTCAT 1661870 Query 78643 CTTTGTATTTGGTAACAATATC-CATGACAGTAGTTGAAATAATAGGAGATCGTACACCA 78701 | | ||| ||| || || ||| | |||| || || || | | || Sbjct 1661871 CGGCATGTTTCATAATTATTTCGTATGTC-TCCTTTGATATCATTGGTGCAGGAGCATTG 1661929 Query 78702 TTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTA-AATAGtttttttGT 78760 ||||| || || ||||||| | | |||| || || || | || | || || || Sbjct 1661930 TTTTTGGGGTTGACATAGTGGTAGAGATCTGAGATGAC-CAACGAGAACTGCTTCTTGGT 1661988 Query 78761 TTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGT 78818 | |||||| || || || || || || | ||||| |||||||| |||||||| ||| Sbjct 1661989 CTGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGAATAGCGTAATCAGGGTGT 1662046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668496082400