Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 113 1e-19 >seq5 Length=3972810 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| ||||| || || || || || |||||||| |||| || || | ||||| Sbjct 3010487 AGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGACAAGGTACGGCCATCC 3010546 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| | | ||||||||||| | || |||||||| ||| Sbjct 3010547 TCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCT 3010606 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | | |||| ||| || ||||| | || || || Sbjct 3010607 TGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAACTTCCAATGTGATCGTC 3010666 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| |||||||| ||||||| |||||| Sbjct 3010667 TTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || ||||| ||| || ||||||||||| |||| | || | Sbjct 3010252 GAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACG 3010311 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || || ||||| || || | |||||| |||| | || || || Sbjct 3010312 TCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTC 3010371 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || | ||||| | || | | || || ||||| || || || || Sbjct 3010372 CTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCGAGCTCTCCACCTCTAGCGT 3010431 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| ||||| ||||||||||||| |||||| Sbjct 3010432 AATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 105 bits (116), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || |||||||| || || |||||||||||||| || | | || | ||||| Sbjct 3010715 AGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGGCCATCC 3010774 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || |||||||| || | ||||||||| | | ||| || ||||| | Sbjct 3010775 TCCAGCTGCTTT--CCCGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGT 3010832 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || || ||| | || | |||| ||| ||| || ||||| || |||| Sbjct 3010833 CCTGAATCTTGGTCTTCACATTGTCGATAGTGTCAGAAGACTCCACCTCAAGGGTGATAG 3010892 Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094 | || || || || ||||| |||| Sbjct 3010893 TCTTTCCGGTCAGGGTCTTGACGA 3010916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820282583485