Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq5 185 2e-41 seq2 125 1e-23 seq1 111 3e-19 seq10 86.0 1e-11 >seq5 Length=3972810 Score = 185 bits (204), Expect = 2e-41 Identities = 180/229 (79%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || ||||| || || || | || ||| || || ||||||||||| | Sbjct 3010471 ACCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGA 3010530 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || ||||||||||| || || || || |||||||||||||| || ||||| | Sbjct 3010531 CAAG-GTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGG 3010589 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| || ||||||||||| ||||| | || ||| ||||||| ||||| |||| ||| | Sbjct 3010590 GAATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAA 3010649 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||||||||| ||||| | |||||| ||||| |||||||| Sbjct 3010650 CTTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698 Score = 156 bits (172), Expect = 9e-33 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| ||| ||||||||||||||||||| Sbjct 3010699 ACCACCACGAAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGA 3010758 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || ||||| | ||| || ||||| || Sbjct 3010759 CAGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGG 3010818 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| || ||||| | || || | ||||||||||| |||| || || Sbjct 3010819 GATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATAGTGTCAGAAGACTCCAC 3010878 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 || || ||||| ||||| || |||| ||||| |||| || Sbjct 3010879 CTCAAGGGTGATAGTCTTTCCGGTCAGGGTCTTGACGACTA 3010919 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | ||||| || || |||||||||||||| | Sbjct 3010244 CCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 3010303 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || ||||| || || || || || || || || | ||| || || || ||| Sbjct 3010304 AGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGA 3010363 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || |||||||| ||||||||||| || ||| |||| ||||| |||| |||| || || Sbjct 3010364 ATGCCCTCCTTATCTTGGATCTTGTTCTTGACGTTATCAATAGTATCCG-AGCTCTCCAC 3010422 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | ||||| ||||| |||||||| Sbjct 3010423 CTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || |||||||||||||||| Sbjct 3011001 ACCACCACGCAGGCGGAGAACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 3011060 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || ||||||| ||| || ||||| || Sbjct 3011061 CAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCGGGAGG 3011120 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| || || | ||||| Sbjct 3011121 GATGCCCTCCTTGTCCTGGATCTTGGTCTTAACGTTGTCGATGGTATCGCTCGACTCGAC 3011180 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 3011181 CTCGAGGGTGATGGTCTTGCCGGT 3011204 >seq2 Length=4967832 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || || || ||||| Sbjct 3524089 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 3524030 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || || || || |||||||||||||| |||||||| | || ||| | ||| Sbjct 3524029 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 3523970 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||| | ||||| ||||| Sbjct 3523969 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 3523911 >seq1 Length=6182763 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || ||||| || | ||| || || |||||||||||||| | Sbjct 4512380 ACCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 4512439 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || ||||||| ||| || ||||| || Sbjct 4512440 AAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGGGGG 4512499 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 4512500 GATACCCTCCTTGTCT 4512515 >seq10 Length=610536 Score = 86.0 bits (94), Expect = 1e-11 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| | || || ||| | |||||||| || | || ||| Sbjct 110017 AGGAGTTCCTGACTGACGCTCTGCCCTGTGCTCTGCTGGGCATGAACTCTAAGCTGATGT 109958 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | || || ||||| ||||| || || || | || ||||| || || || |||| | Sbjct 109957 GCCAGTACATCGAGTTCGTCGCGGACCGCCTGTTGGTGGCCCTTGGCAACAAGAAGTACT 109898 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| ||| ||||||||||| || |||||| || || || ||| || || |||| Sbjct 109897 ACAACGCCACGAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACT 109838 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 |||| || ||||| || | || || || | | | ||||| Sbjct 109837 TCTTTGAGAAGCGGGTGGGTGACTACCAGAAGGCTGGTGT 109798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738730602890