Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 143 6e-29 seq2 120 7e-22 >seq5 Length=3972810 Score = 143 bits (158), Expect = 6e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || |||||||| |||||||| || ||||| |||| Sbjct 3010916 TCGTCAAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCG 3010857 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || |||||||||||||| || || |||||||| |||||||| || || | Sbjct 3010856 ACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCA 3010797 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| ||||| ||||| || ||||| | || || | || || ||| ||||||| | Sbjct 3010796 TCTTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGG 3010737 Query 178111 AATCAACACTGCATCTTGT 178129 |||| || || || || || Sbjct 3010736 AATCCACTCTTCACCTCGT 3010718 Score = 132 bits (146), Expect = 1e-25 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| || ||||| |||||||| | || || ||| || ||| Sbjct 3010695 CAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCCGAC 3010636 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||| ||||| ||||| || || ||||||||||| Sbjct 3010635 ACCATCGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCAGCAG 3010576 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | ||||| || || || ||||| || ||||| | || |||| |||| || ||| | Sbjct 3010575 CGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTAC-CTTGTCCGACTACAACAT 3010517 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || || ||||| Sbjct 3010516 TCAGAAGGAATCGACCCTTCACCTTGT 3010490 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCATCGAGAACGTCA 177999 |||| || || || |||||||||||||| || ||| || |||||||| ||||| | Sbjct 3011206 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC---GATACCATCGACAACGTTA 3011150 Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059 | ||||| |||||||| || || |||||||| |||||||| || || |||||||| | Sbjct 3011149 AGACCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCTG 3011090 Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119 |||| ||||| || ||||| | || || | || || ||| |||| || || || || | Sbjct 3011089 GAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTCTACTC 3011030 Query 178120 TGCATCTTGTT 178130 | || || ||| Sbjct 3011029 TCCACCTCGTT 3011019 >seq2 Length=4967832 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || ||||| || || || || |||||||| || || ||| ||||| Sbjct 3523910 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 3523966 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| ||||| ||||| || Sbjct 3523967 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCG 3524026 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 ||||||||||| || || ||||| || ||||| | || || ||| || ||| |||| Sbjct 3524027 TCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 3524086 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 3524087 GAAGGTATGAA 3524097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730660201790