Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1
_202016-03-01] 35 sequences; 36,062,713 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 6e-29
seq2 120 7e-22
>seq5
Length=3972810
Score = 143 bits (158), Expect = 6e-29
Identities = 151/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || || || ||||| || |||||||| |||||||| || ||||| ||||
Sbjct 3010916 TCGTCAAGACCCTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCTTCTGACACTATCG 3010857
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || || || |||||||||||||| || || |||||||| |||||||| || || |
Sbjct 3010856 ACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTCA 3010797
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
||||||| ||||| ||||| || ||||| | || || | || || ||| ||||||| |
Sbjct 3010796 TCTTCGCGGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAAAAGG 3010737
Query 178111 AATCAACACTGCATCTTGT 178129
|||| || || || || ||
Sbjct 3010736 AATCCACTCTTCACCTCGT 3010718
Score = 132 bits (146), Expect = 1e-25
Identities = 155/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || ||||| |||||||| | || || ||| || |||
Sbjct 3010695 CAGATCTTCGTCAAGACTCTTACGGGAAAGACGATCACATTGGAAGTTGAATCTTCCGAC 3010636
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || |||||||| ||||| ||||| || || |||||||||||
Sbjct 3010635 ACCATCGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATTCCCCCGGACCAGCAG 3010576
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| | ||||| || || || ||||| || ||||| | || |||| |||| || ||| |
Sbjct 3010575 CGTTTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTAC-CTTGTCCGACTACAACAT 3010517
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || || |||||
Sbjct 3010516 TCAGAAGGAATCGACCCTTCACCTTGT 3010490
Score = 120 bits (132), Expect = 7e-22
Identities = 142/191 (74%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCATCGAGAACGTCA 177999
|||| || || || |||||||||||||| || ||| || |||||||| ||||| |
Sbjct 3011206 TCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC---GATACCATCGACAACGTTA 3011150
Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059
| ||||| |||||||| || || |||||||| |||||||| || || |||||||| |
Sbjct 3011149 AGACCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCTG 3011090
Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119
|||| ||||| || ||||| | || || | || || ||| |||| || || || || |
Sbjct 3011089 GAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATCCAGAAGGAGTCTACTC 3011030
Query 178120 TGCATCTTGTT 178130
| || || |||
Sbjct 3011029 TCCACCTCGTT 3011019
>seq2
Length=4967832
Score = 120 bits (132), Expect = 7e-22
Identities = 142/191 (74%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || ||||| || || || || |||||||| || || ||| |||||
Sbjct 3523910 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 3523966
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || ||||| ||||| ||||| ||
Sbjct 3523967 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCG 3524026
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
||||||||||| || || ||||| || ||||| | || || ||| || ||| ||||
Sbjct 3524027 TCTTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 3524086
Query 178106 AAAAGAATCAA 178116
|| | || ||
Sbjct 3524087 GAAGGTATGAA 3524097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730660201790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |