Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20awamori_20var._20piceus_20[genbank_20GCA_5F001599415.1 _202016-03-01] 35 sequences; 36,062,713 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq2 111 1e-19 seq1 105 6e-18 >seq5 Length=3972810 Score = 140 bits (154), Expect = 3e-28 Identities = 172/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct 3010244 CCACCACGGAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 3010303 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || |||||||| || ||||| || || ||||| || |||| |||| Sbjct 3010304 AGCGTACGTCCATCTTCCAGCTGCTTACCAGCGAAAATGAGACGCTGCTGATCCGGGGGA 3010363 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || |||||| || ||| || | ||| ||| | | ||| || ||| ||| Sbjct 3010364 ATGCCCTCCTTATCTTGGATCTTGTTCTT-GACGTTATCAATAGTATCCGAGCT---CTC 3010419 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| | ||| ||||| || || || || ||||| ||||| |||||||| Sbjct 3010420 CACCTCTAGCGTAATCGTCTTGCCGGTGAGTGTCTTCACGAAGATCTGCAT 3010470 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || |||||||||||||| |||||||| Sbjct 3010472 CCACCACGGAGACGAAGGACAAGGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAC 3010531 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || | || || |||||||| || || || |||| ||||| ||||||| |||| Sbjct 3010532 AAGGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 3010591 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | ||| | || | | |||| | | |||||| || || || Sbjct 3010592 ATGCCTTCCTTGT-CTTGAATCTTGGTCTTAACGTTATCGATGGTGTCGGAAGATTCAAC 3010650 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||| || ||||| || ||||| ||||| |||||||| Sbjct 3010651 TTCCAATGTGATCGTCTTTCCCGTAAGAGTCTTGACGAAGATCTGCAT 3010698 Score = 102 bits (112), Expect = 8e-17 Identities = 157/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| ||||| || ||||| ||||| || Sbjct 3010700 CCACCACGAAGACGAAGGACGAGGTGAAGAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 3010759 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || |||||||| || ||||| || || ||||| ||||| | || Sbjct 3010760 AGGGTACGGCCATCCTCCAGCTGCTTTCCCGCGAAGATGAGACGCTGCTGGTCGGGAGGG 3010819 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || | ||||| | | | | |||||| ||||||| Sbjct 3010820 ATGCCCTCCTTGTCC-TGAATCTTGGTCTTCA-CATTGTCGATAGTGTCAGAAGACTCCA 3010877 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||| | || || || || || ||||| ||||| |||| Sbjct 3010878 CCTCAAGGGTGATAGTCTTTCCGGTCAGGGTCTTGACGA 3010916 Score = 100 bits (110), Expect = 3e-16 Identities = 125/169 (74%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| ||||| || ||||| || | || || |||||||| || ||||| Sbjct 3011037 CTCCTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAA 3011096 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||| ||||| ||||| | || | || |||||||||| ||| || ||| |||| Sbjct 3011097 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT-AACGT 3011155 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 | | | || ||||||||||| ||||| | || || || || || || Sbjct 3011156 TGTCGATGGTATCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 3011204 >seq2 Length=4967832 Score = 111 bits (122), Expect = 1e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || || |||||||| || ||||| | Sbjct 3524091 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 3524032 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 | || ||||| || |||| ||| | | |||||||||| ||| || ||| | || | Sbjct 3524031 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 3523973 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || |||||||| || ||||| ||| Sbjct 3523972 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 3523913 Query 41852 AAA 41854 ||| Sbjct 3523912 AAA 3523910 >seq1 Length=6182763 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | |||||| || || ||| ||||||||| ||||| ||||| Sbjct 4512377 ACCACCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 4512436 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || || || |||| ||||||||||| || ||||| ||||| ||||| ||||| | Sbjct 4512437 CGAAAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCGGG 4512496 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||| | | ||||||||| Sbjct 4512497 GGGGATACCCTCCTTGTC 4512514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303797742000