Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq77 116 4e-21 seq11 100 3e-16 >seq77 Length=177937 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| |||| |||||| ||||||||||| || || ||||| || | || || || | Sbjct 158730 ACGCAGGACCAGATGCAAGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGTCC 158671 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || |||||||| |||||||| || || || || |||||||| | || | || |||||| Sbjct 158670 ATCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCCTCCTT 158611 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 43143 || | ||| | |||| |||| | | | ||||| |||| || || || | | Sbjct 158610 GT-CTTGAATCTTTGACTTGACGTTATCGATAGTGTCCGAGCTC---TCAACTTCCAAAG 158555 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| ||||| || || ||||| |||||||| ||||| Sbjct 158554 TGATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 158515 Score = 105 bits (116), Expect = 8e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| |||||||| ||||||||| || ||||| |||| ||| || || | || || Sbjct 158495 ACCAAGTGCAATGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCG 158436 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || ||||| ||||| ||||||||||| | || | | |||||| | | || Sbjct 158435 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTAT-CTTG 158377 Query 43095 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | | |||| || | | | | |||||| |||||| || || | ||||| || || Sbjct 158376 AATCTTTGACTTCACATTGTCGATTGTGTCGGACGATTCAACCTCCAGTGTGATTGTCTT 158317 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || || || ||||| Sbjct 158316 TCCAGTGAGAGTCTTGACGAAAATCTGCAT 158287 Score = 102 bits (112), Expect = 9e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| ||||||||||| || | |||||| || | || || ||||||||||||||||| Sbjct 158249 TCCTTCTGAATATTGTAGTCGGACAGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAG 158190 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || | ||||||||||||| || | || ||||||||| ||| || |||| | Sbjct 158189 ATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTA 158130 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || |||||||| || || || | ||||| || || || || || ||||| || Sbjct 158129 TCGATGGTATCGCTCGACTCGACCTCAAGGGTGATAGTCTTTCCTGTGAGGGTCTTCAC 158071 >seq11 Length=432242 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || ||||||||||| ||||| | Sbjct 174888 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 174829 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | | |||||||||| ||| || |||| ||| | Sbjct 174828 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 174770 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 174769 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 174710 Query 43173 AA 43174 || Sbjct 174709 AA 174708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814383526000