Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq56 196 6e-45 seq110 102 1e-16 >seq56 Length=212660 Score = 196 bits (216), Expect = 6e-45 Identities = 594/909 (65%), Gaps = 14/909 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 ||||| || || || |||||| | |||| | || || | ||||| | | | | Sbjct 98027 TCGAATTCATCACCATAAACATCGGCCAAGCCGGGGGCCTCGTTAGGACAGAAGAGAGTC 98086 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 ||||| |||| | | || || ||||| || | || ||| |||| || || ||| || Sbjct 98087 CACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 98145 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | ||| |||||| || || ||||| ||||| ||||| | | Sbjct 98146 GAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGATCAAGGAATTCGAA 98205 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 || ||| | ||||| ||||||||||| ||||| | | | || || || ||||||||||| Sbjct 98206 AACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 98265 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 98266 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTGGA 98325 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGA 63545 ||||||||||| || ||| || | |||||||| | | |||| || Sbjct 98326 GGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGGTGCACATTG--AGG 98383 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 || ||||| || || | || ||||| ||||| || || | |||||||| || ||| Sbjct 98384 CCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGAGGGTGTCATAAATACCT 98443 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 || |||||||| || |||| | | || || || || | || | ||| || Sbjct 98444 TCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 98503 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 || ||||| || ||||| || || || || || || | || | ||| | | | || Sbjct 98504 CCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 98563 Query 63726 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63783 ||||| ||||| ||| || |||| |||||||| || || |||||||| || | Sbjct 98564 GTCTCGATAGC--CTTCTCAATGTCATTACCGTGAATTCCAACAGCAACACGCATCAAAA 98621 Query 63784 TGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63843 ||||||||| | |||| ||| || | || || |||||| || || | || Sbjct 98622 GGTGCTGAGGGCGTTCAGCAACCTTTCCATCAATCCGCAGCAAGTATGACCGCTCAAGAG 98681 Query 63844 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901 | || || || ||| ||||||| ||||| || || || || | |||| | || ||||| Sbjct 98682 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCACGGTCATACACAATAGCTGAGTTGAG 98739 Query 63902 CTTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTT 63961 | || || ||| | | || || || |||| || ||||| | | | || Sbjct 98740 TTCGTCGGCATGTTTCATGATAATCTCGTACGTTTCCTTTGATATCATCGGGGCAGGCTT 98799 Query 63962 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 64021 | ||| || || || | ||||| | ||| || || || |||| | || || Sbjct 98800 CTTATTCTTTGGGTTGATATAGTGGTATAGGTCTGAGATAACCAGGGAAAATTGCTTCTT 98859 Query 64022 tGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 |||| |||||| || || || | ||||| | || || |||||||| || || ||||| Sbjct 98860 CGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGATG 98919 Query 64082 TTGTGTAGT 64090 | ||||| Sbjct 98920 TGTGGTAGT 98928 >seq110 Length=120091 Score = 102 bits (112), Expect = 1e-16 Identities = 141/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655 ||| |||||||| || | | || | ||||| || || || || |||||||| | ||| Sbjct 77352 GTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAAGCC 77411 Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715 |||||| || ||||| || || || ||||| ||||| || |||||||| || || || || Sbjct 77412 ACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGC 77471 Query 33716 AGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCTGT--CATGTATCCACTTTTGAGC 33772 |||||||| | ||| | || ||| | || | || | | || ||||| ||| Sbjct 77472 GGCAAAGGCCACAAGACGCTGGCCAAAGGTCGACTCTTTATCCTGAATCCAGCGGATAGC 77531 Query 33773 CCAATCGGCCTTCTT 33787 ||||||||||||||| Sbjct 77532 CCAATCGGCCTTCTT 77546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629814057276000