Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq56 197 2e-45 seq110 102 1e-16 >seq56 Length=212660 Score = 197 bits (218), Expect = 2e-45 Identities = 600/913 (66%), Gaps = 22/913 (2%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 ||||| || || || |||||| | |||| || || || | ||||| | | | | Sbjct 98027 TCGAATTCATCACCATAAACATCGGCCAAGCCGGGGGCCTCGTTAGGACAGAAGAGAGTC 98086 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 66100 ||||| |||| | | || || ||||| || | || ||| |||| || || ||| || Sbjct 98087 CACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 98145 Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160 | ||| | | ||| |||||| || || ||||| ||||| ||||| | | Sbjct 98146 GAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGATCAAGGAATTCGAA 98205 Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220 || ||| ||||| ||||||||||| ||||| | | | || || || ||||||||||| Sbjct 98206 AACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 98265 Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 98266 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTGGA 98325 Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGA 66338 | |||||||| || || ||| || | |||||||| | | |||| || Sbjct 98326 GGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGGTGCACATTG--AGG 98383 Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398 || ||||| || || | || ||||| ||||| || || | || ||||| || || Sbjct 98384 CCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGAGGGTGTCATAAATACCT 98443 Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458 || || ||||| ||| |||| | | || || || || | || | || || Sbjct 98444 TCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 98503 Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 || ||||| || ||||| || || || || || || | || | ||| | | | || Sbjct 98504 CCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 98563 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 66576 ||||| ||||| ||| || |||| |||||||| || || |||||||| || | Sbjct 98564 GTCTCGATAGC--CTTCTCAATGTCATTACCGTGAATTCCAACAGCAACACGCATCAAAA 98621 Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636 ||||||||| | |||| | | ||| | || || |||||| || || | || Sbjct 98622 GGTGCTGAGGGCGTTCAGCAACCTTTCCATCAATCCGCAGCAAGTATGACCGCTCAAGAG 98681 Query 66637 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694 | || || || ||| ||||||| ||||| || || || || | |||| | |||||||| Sbjct 98682 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCACGGTCATACACAATAGCTGAGTTGAG 98739 Query 66695 TTTATCCTTATATTTGTTAACTACATCCATGGTA--ATAC--TTGAAATAATCGGAGAAT 66750 || || || ||| | | || ||| | ||| | | |||| || ||||| | | Sbjct 98740 TTCGTCGGCATGTTTCATGA-TA-ATC--TCGTACGTTTCCTTTGATATCATCGGGGCAG 98795 Query 66751 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 66810 | ||| ||| || || |||| ||||| | ||| || || || |||| | | Sbjct 98796 GCTTCTTATTCTTTGGGTTGATATAGTGGTATAGGTCTGAGATAACCAGGGAAAATTGCT 98855 Query 66811 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCG 66870 | || |||| ||||| || || || || ||||| | ||| || | |||||| || || | Sbjct 98856 TCTTCGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTG 98915 Query 66871 GATGTTGTGTAGT 66883 ||||| ||||| Sbjct 98916 GATGTGTGGTAGT 98928 >seq110 Length=120091 Score = 102 bits (112), Expect = 1e-16 Identities = 141/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231 ||| |||||||| || | | || | |||||||| || || || |||||||| | ||| Sbjct 77352 GTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAAGCC 77411 Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291 |||||| || ||||| || || || || || |||||||| ||||| || || || || || Sbjct 77412 ACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGC 77471 Query 36292 CGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCACTGT--CATGTATCCACTTTTGAGC 36348 |||||||| | ||| | || ||| | || | || | | || ||||| ||| Sbjct 77472 GGCAAAGGCCACAAGACGCTGGCCAAAGGTCGACTCTTTATCCTGAATCCAGCGGATAGC 77531 Query 36349 CCAATCGGCCTTCTT 36363 ||||||||||||||| Sbjct 77532 CCAATCGGCCTTCTT 77546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169097778000