Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq56 219 6e-52 seq110 116 5e-21 >seq56 Length=212660 Score = 219 bits (242), Expect = 6e-52 Identities = 605/913 (66%), Gaps = 22/913 (2%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||| || || || |||||||| | || || || |||| |||||| | | | | Sbjct 98027 TCGAATTCATCACCATAAACATCGGCCAAGCCGGGGGCCTCGTTAGGACAGAAGAGAGTC 98086 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979 ||||| || | | | || || ||||| || | || ||| |||| || || ||| || Sbjct 98087 CACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 98145 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||| | | ||| ||||| || || ||||| ||||| ||||| | | Sbjct 98146 GAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGATCAAGGAATTCGAA 98205 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 || ||| | ||||| ||||||||||| ||||| | | | || || || ||||||||||| Sbjct 98206 AACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 98265 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 98266 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTGGA 98325 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 80217 | |||||||| || || ||| || | |||||||| | | |||| || Sbjct 98326 GGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGGTGCACATTG--AGG 98383 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || ||||| || || | || ||||| ||||| || || | || ||||| || || Sbjct 98384 CCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGAGGGTGTCATAAATACCT 98443 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337 || |||||||| || |||| | | || || || || | || | || || Sbjct 98444 TCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 98503 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || ||||| || ||||| || || || || || || | || | ||||| | | || Sbjct 98504 CCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 98563 Query 80398 GTCTCAATAGCTGATTCTATATCCCATT--GATGAATTCCTACCGCGACACGCATTAACA 80455 ||||| ||||| |||| || |||| |||||||| || || |||||||| || | Sbjct 98564 GTCTCGATAGC--CTTCTCAATGTCATTACCGTGAATTCCAACAGCAACACGCATCAAAA 98621 Query 80456 TGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAG 80515 ||||||||| | |||| | | ||| || || || |||||| || || | || Sbjct 98622 GGTGCTGAGGGCGTTCAGCAACCTTTCCATCAATCCGCAGCAAGTATGACCGCTCAAGAG 98681 Query 80516 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 | || || || ||| ||||||| ||||| || || || || | |||| | |||||||| Sbjct 98682 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCACGGTCATACACAATAGCTGAGTTGAG 98739 Query 80574 TTTATCCTTATATTTGTTAACTACATCCATGGT--GATAC--TTGAAATAATCGGAGAAT 80629 || || || ||| | | || ||| | || | | | |||| || ||||| | | Sbjct 98740 TTCGTCGGCATGTTTCATGA-TA-ATC--TCGTACGTTTCCTTTGATATCATCGGGGCAG 98795 Query 80630 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 80689 | ||| ||| || || || | ||||| | ||| || || || |||| | | Sbjct 98796 GCTTCTTATTCTTTGGGTTGATATAGTGGTATAGGTCTGAGATAACCAGGGAAAATTGCT 98855 Query 80690 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTG 80749 | || |||| |||||| || || || || ||||| | || || | |||||| || |||| Sbjct 98856 TCTTCGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTG 98915 Query 80750 GATGTTGTGTAGT 80762 ||||| ||||| Sbjct 98916 GATGTGTGGTAGT 98928 >seq110 Length=120091 Score = 116 bits (128), Expect = 5e-21 Identities = 143/195 (73%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||| |||||||| || | | || || |||||||| || || || |||||||| | ||| Sbjct 77352 GTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAAGCC 77411 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 |||||| || ||||| || || || || || || ||||| |||||||| || || || || Sbjct 77412 ACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGC 77471 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGC 50150 ||||||||| ||||| | || ||| | | | | | || || ||||| ||| Sbjct 77472 GGCAAAGGCCACAAGACGCTGGCCAAAGGTCGACTCTTTATCCTGAATCCAGCGGATAGC 77531 Query 50151 CCAATCGGCCTTCTT 50165 ||||||||||||||| Sbjct 77532 CCAATCGGCCTTCTT 77546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264759738000