Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq56 205 1e-47 seq110 116 5e-21 >seq56 Length=212660 Score = 205 bits (226), Expect = 1e-47 Identities = 596/909 (66%), Gaps = 14/909 (2%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 ||||| || || || || ||| | | || || || || || ||||| | | | | Sbjct 98027 TCGAATTCATCACCATAAACATCGGCCAAGCCGGGGGCCTCGTTAGGACAGAAGAGAGTC 98086 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 72062 ||||| || | | | || || ||||| || | || ||| |||| || || ||| || Sbjct 98087 CACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 98145 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 ||||| | | ||| ||||| || || ||||| ||||| ||||| | | Sbjct 98146 GAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGATCAAGGAATTCGAA 98205 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 || ||| | ||||| ||||||||||| ||||| | | | || || || ||||||||||| Sbjct 98206 AACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 98265 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 98266 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTGGA 98325 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGA 72300 | |||||||| || || ||| || | |||||||| ||| |||| || Sbjct 98326 GGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGGTGCACATTG--AGG 98383 Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360 || ||||| || || | || ||||| ||||| || || | || ||||| || || Sbjct 98384 CCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGAGGGTGTCATAAATACCT 98443 Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420 || || ||||| ||| |||| | | || || || || | || | || || Sbjct 98444 TCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 98503 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 || ||||| || ||||| || || || || || || | || | ||||| | | || Sbjct 98504 CCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 98563 Query 72481 GTCTCAATAGCTGATTCTATATCCCATT--GATGTATTCCTACCGCGACACGCATTAACA 72538 ||||| ||||| |||| || |||| || ||||| || || |||||||| || | Sbjct 98564 GTCTCGATAGC--CTTCTCAATGTCATTACCGTGAATTCCAACAGCAACACGCATCAAAA 98621 Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598 |||||||| | |||| | | ||| || || || |||||| || || | || Sbjct 98622 GGTGCTGAGGGCGTTCAGCAACCTTTCCATCAATCCGCAGCAAGTATGACCGCTCAAGAG 98681 Query 72599 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 72656 | || || || ||| ||||||| ||||| || || || || | |||| | || ||||| Sbjct 98682 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCACGGTCATACACAATAGCTGAGTTGAG 98739 Query 72657 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTT 72716 || || || ||| | | || || || |||| || ||||| | | | || Sbjct 98740 TTCGTCGGCATGTTTCATGATAATCTCGTACGTTTCCTTTGATATCATCGGGGCAGGCTT 98799 Query 72717 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 72776 | ||| || || || | ||||| | ||| || || || |||| | || || Sbjct 98800 CTTATTCTTTGGGTTGATATAGTGGTATAGGTCTGAGATAACCAGGGAAAATTGCTTCTT 98859 Query 72777 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 |||| |||||| || || || || ||||| | || || |||||||| || |||||||| Sbjct 98860 CGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGATG 98919 Query 72837 TTGTGTAGT 72845 | ||||| Sbjct 98920 TGTGGTAGT 98928 >seq110 Length=120091 Score = 116 bits (128), Expect = 5e-21 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 ||| ||||||||||| | | || | |||||||| || || || |||||||| | ||| Sbjct 77352 GTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAAGCC 77411 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 |||||| || ||||| || ||||| || || |||||||| |||||||| || || || || Sbjct 77412 ACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGC 77471 Query 42199 CGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC--TGTCATGTATCCACTTTTGAGC 42255 |||||||| | ||| | || ||| | || | | | || || ||||| ||| Sbjct 77472 GGCAAAGGCCACAAGACGCTGGCCAAAGGTCGACTCTTTATCCTGAATCCAGCGGATAGC 77531 Query 42256 CCAATCGGCCTTCTT 42270 ||||||||||||||| Sbjct 77532 CCAATCGGCCTTCTT 77546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135424842000