Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq110 145 1e-29 seq56 95.1 2e-14 >seq110 Length=120091 Score = 145 bits (160), Expect = 1e-29 Identities = 296/435 (68%), Gaps = 21/435 (5%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || ||||| || ||||| || ||||| |||||||| || || ||| || | ||||| Sbjct 77486 CTTGTGGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCTTTCGCCTCTATCTTC 77427 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || | |||||||| || || | |||||| | || ||||| Sbjct 77426 TGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGT 77367 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 || ||||| || ||| ||||||||| ||| || || ||||| || | |||||| Sbjct 77366 GATGAGGGTCTCCACACTGACTTTGCTTGTCTCCTCTTCTCGCACCTGAACAACCGTCCC 77307 Query 125604 GAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAA 125663 || | ||| | || | | | | | | | | | | | ||| || || Sbjct 77306 GACCCC-----CAG-GTTGTGGAAGACGTTATCGTGGAAGCTGTCGCC------ATTGAG 77259 Query 125664 CAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATG 125723 ||||||| || || || | || || | | |||| ||||||| ||| ||||| Sbjct 77258 AAAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGTATGAACTCCAACTTAATG 77199 Query 125724 TGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATT 125783 ||| ||||||| ||||| || || || ||||| ||| || | |||| ||||| Sbjct 77198 TGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCCCT---TGGCAACAAGAAG 77142 Query 125784 TAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACC 125840 ||| ||||||| || |||||||| |||||| || ||| || |||| ||||||||| Sbjct 77141 TACTTCAACGCCACCAACCCCTTTGACTTCATGGACAACATCTCCCTAGCTGGTAAGACC 77082 Query 125841 AACTTTTTCGAGAAG 125855 ||||| ||||||||| Sbjct 77081 AACTTCTTCGAGAAG 77067 Score = 136 bits (150), Expect = 6e-27 Identities = 199/279 (71%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| |||||| ||||||| || ||||| | |||||| | ||||| Sbjct 77945 ATCTGGCAAATGTACAAGAAGGCTGAGGCCTCTTTCTGGACCGCCGAAGAAATTGATCTC 77886 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||||||| | | || ||| || ||||| | || || || Sbjct 77885 TCTAAGGATCTTCACGATTGGCACAACCGCCTGAACGATGACGAGCGCTACTTCATCTCT 77826 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 | | | | ||||||||||| | ||||||||| || || ||||| || ||| | || Sbjct 77825 CGCGTCCTTGCCTTCTTTGCTGCCTCCGATGGCATTGTAAACGAAAACCTGCTCGAGCGT 77766 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 ||| |||| || || || || | ||| ||||| ||||| |||||||||||||| Sbjct 77765 TTCAGCGGAGAGGTGCAGATCCCTGAAG-CTCGTTGCTTCTACGGTTTCCAAATCATGAT 77707 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 |||||| | ||||| || | |||||| ||||||| Sbjct 77706 CGAGAACATCCACTCCGAGACCTACTCTCTTTTGATTGA 77668 >seq56 Length=212660 Score = 95.1 bits (104), Expect = 2e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 96820 CCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAG 96878 ||| ||| | || || |||||| | ||| ||| || || || |||| || ||| Sbjct 98324 CCAATGGTATTGTTCCTATGCTCCGGGTGTTCAACAACACTGCCA-GATATGTAGACCAG 98266 Query 96879 GGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTT 96938 || || || || || ||||| ||| | ||| |||||||||||||||||||||| || ||| Sbjct 98265 GGAGGAAACAAGCGTCCAGGTGCTTTTGCCATCTACTTGGAACCTTGGCACGCCGATGTT 98206 Query 96939 TTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTG 96998 || || || | || | ||||| ||| ||| || || | |||| | || | Sbjct 98205 TTCGAATTCCTTGATCTCCGCAAGAACCATGGTAAGGAGGAAGTGAGAGCTCGTGATCTC 98146 Query 96999 TTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT 97039 || ||||| |||||| || || |||||||||||||| || Sbjct 98145 TTCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGGGT 98105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055031542000