Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq56 210 3e-49 seq110 116 5e-21 >seq56 Length=212660 Score = 210 bits (232), Expect = 3e-49 Identities = 597/909 (66%), Gaps = 14/909 (2%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||| || || || |||||| | |||| || || || | ||||| | | | | Sbjct 98027 TCGAATTCATCACCATAAACATCGGCCAAGCCGGGGGCCTCGTTAGGACAGAAGAGAGTC 98086 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 ||||| |||| | | || || ||||| || | || ||| |||| || || ||| || Sbjct 98087 CACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 98145 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 ||||| | | ||| |||||| || || ||||| ||||| ||||| | | Sbjct 98146 GAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGATCAAGGAATTCGAA 98205 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 || ||| | ||||| ||||||||||| ||||| | | | || || || ||||||||||| Sbjct 98206 AACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 98265 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 98266 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTGGA 98325 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63494 ||||||||||| || ||| || | |||||||| | | |||| || Sbjct 98326 GGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGGTGCACATTG--AGG 98383 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || ||||| || || | || ||||| ||||| || || | |||||||| ||||| Sbjct 98384 CCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGAGGGTGTCATAAATACCT 98443 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || |||||||| || |||| | | || || || || | || | || || Sbjct 98444 TCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 98503 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || ||||| || ||||| || || || || || || | || | ||| | | | || Sbjct 98504 CCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 98563 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63732 ||||| ||||| ||| || |||| |||||||| || || |||||||| || | Sbjct 98564 GTCTCGATAGC--CTTCTCAATGTCATTACCGTGAATTCCAACAGCAACACGCATCAAAA 98621 Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63792 ||||||||| | |||| | | ||| | || || |||||| || || | || Sbjct 98622 GGTGCTGAGGGCGTTCAGCAACCTTTCCATCAATCCGCAGCAAGTATGACCGCTCAAGAG 98681 Query 63793 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850 | || || || ||| ||||||| ||||| || || || || | |||| | |||||||| Sbjct 98682 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCACGGTCATACACAATAGCTGAGTTGAG 98739 Query 63851 TTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTT 63910 || || || ||| | | || || || |||| || ||||| | | | || Sbjct 98740 TTCGTCGGCATGTTTCATGATAATCTCGTACGTTTCCTTTGATATCATCGGGGCAGGCTT 98799 Query 63911 CCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 63970 | ||| || || || | ||||| | ||| || || || |||| | || || Sbjct 98800 CTTATTCTTTGGGTTGATATAGTGGTATAGGTCTGAGATAACCAGGGAAAATTGCTTCTT 98859 Query 63971 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 |||| |||||| || || || || ||||| | || || |||||||| || || ||||| Sbjct 98860 CGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGATG 98919 Query 64031 TTGTGTAGT 64039 | ||||| Sbjct 98920 TGTGGTAGT 98928 >seq110 Length=120091 Score = 116 bits (128), Expect = 5e-21 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||| |||||||| || | | || || |||||||| || || || |||||||| | ||| Sbjct 77352 GTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAAGCC 77411 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 |||||| || ||||| || || || ||||| |||||||| |||||||| || || || || Sbjct 77412 ACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATACCCTCAACAGC 77471 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAAC-CGGCGCTGT--CATGTATCCACTTTTGAGC 33494 |||||||| | ||| | || ||| | || | || | | || ||||| ||| Sbjct 77472 GGCAAAGGCCACAAGACGCTGGCCAAAGGTCGACTCTTTATCCTGAATCCAGCGGATAGC 77531 Query 33495 CCAATCGGCCTTCTT 33509 ||||||||||||||| Sbjct 77532 CCAATCGGCCTTCTT 77546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943695922000