Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19]
450 sequences; 37,474,605 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq272 140 2e-28
seq77 102 5e-17
>seq272
Length=6121
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 5277 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5218
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 5217 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5183
>seq77
Length=177937
Score = 102 bits (112), Expect = 5e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146
||| ||||| | | ||||| |||| ||| | ||||||||||| || || ||||| ||
Sbjct 158745 ATTTCCACCACGGAGACGCAGGACCAGATGCAAGGTGCTCTCCTTCTGGATGTTGTAGTC 158686
Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206
|| | ||| | || |||| ||||| || ||||| || || ||||| || || |
Sbjct 158685 GGAGAGTGTGCGTCCATCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGCTGGTCAGG 158626
Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266
||||| ||| || ||||| ||| ||| ||| || || | || ||| || || ||
Sbjct 158625 GGGGATGCCCTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATAGTGTCCGAGCTCTC 158566
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| || || || || || || || | || || || || ||||||||
Sbjct 158565 AACTTCCAAAGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 158515
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/225 (70%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | ||| |||| ||||| |||||||| ||||| ||||||||||| || |
Sbjct 158287 TACCACCACGCAAGCGCAGAACCAAGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCGG 158228
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| | ||| | || || | || || || || || || | ||| || || |||| |
Sbjct 158227 ACAGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCGGGAG 158168
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTC 38266
| | |||||| |||||| || || ||| ||||| | || |||| ||| || ||
Sbjct 158167 GAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATGGTATCGCTCGAC--TC 158110
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATAT 38311
|| || | || ||||| || || || | ||| ||||||| |||
Sbjct 158109 GACCTCAAGGGTGATAGTCTTTCCTGTGAGGGTCTTCACGACTAT 158065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945363023950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |