Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq272 140 2e-28 seq77 102 5e-17 >seq272 Length=6121 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5277 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5218 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5217 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5183 >seq77 Length=177937 Score = 102 bits (112), Expect = 5e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38087 ATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATC 38146 ||| ||||| | | ||||| |||| ||| | ||||||||||| || || ||||| || Sbjct 158745 ATTTCCACCACGGAGACGCAGGACCAGATGCAAGGTGCTCTCCTTCTGGATGTTGTAGTC 158686 Query 38147 AGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGA 38206 || | ||| | || |||| ||||| || ||||| || || ||||| || || | Sbjct 158685 GGAGAGTGTGCGTCCATCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGCTGGTCAGG 158626 Query 38207 GGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTC 38266 ||||| ||| || ||||| ||| ||| ||| || || | || ||| || || || Sbjct 158625 GGGGATGCCCTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATAGTGTCCGAGCTCTC 158566 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||| || || || || || || || | || || || || |||||||| Sbjct 158565 AACTTCCAAAGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 158515 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/225 (70%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| |||| ||||| |||||||| ||||| ||||||||||| || | Sbjct 158287 TACCACCACGCAAGCGCAGAACCAAGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCGG 158228 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| | || || | || || || || || || | ||| || || |||| | Sbjct 158227 ACAGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCGGGAG 158168 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTC 38266 | | |||||| |||||| || || ||| ||||| | || |||| ||| || || Sbjct 158167 GAATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATGGTATCGCTCGAC--TC 158110 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATAT 38311 || || | || ||||| || || || | ||| ||||||| ||| Sbjct 158109 GACCTCAAGGGTGATAGTCTTTCCTGTGAGGGTCTTCACGACTAT 158065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945363023950