Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq77 122 7e-23 seq11 86.0 5e-12 >seq77 Length=177937 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || ||||| | ||||| || | | | Sbjct 158515 ATGCAGATCTTTGTCAAGACACTCACTGGCAAGACCATCACTTTGGAAGTTGAGAGCTCG 158574 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||| ||||||||||||||||| || || || || || Sbjct 158575 GACACTATCGATAACGTCAAGTCAAAGATTCAAGACAAGGAGGGCATCCCCCCTGACCAG 158634 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || |||||| |||||||| ||||| ||||||| |||||| Sbjct 158635 CAACGTCTTATCTTTGCTGGTAAACAGCTAGAGGATGGACGCACACTCTCCGACTACAAC 158694 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || || || |||| | ||| | || |||| Sbjct 158695 ATCCAGAAGGAGAGCACCTTGCATCTGGTCCTGCG 158729 >seq11 Length=432242 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 174707 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 174766 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || |||||||||||||| || ||||| || || ||||| Sbjct 174767 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 174826 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 174827 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 174886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725698054250