Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19]
450 sequences; 37,474,605 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq110 131 3e-25
seq2 114 3e-20
>seq110
Length=120091
Score = 131 bits (144), Expect = 3e-25
Identities = 277/407 (68%), Gaps = 16/407 (4%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||| || | || ||||| ||||||||||| |||||||| |||
Sbjct 77071 TCGAAGAAGTTGGTCTTACCAGCTAGGGAGATGTTGTCCATGAAGTCAAAGGGGTTGGTG 77130
Query 251623 GCATT---GTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679
|| || ||||| |||| | |||||| || || | || ||||| || || |||||
Sbjct 77131 GCGTTGAAGTACTTCTTG---TTGCCAAGGGCGACCAGGAGACGGTCGGCGACGAACTCA 77187
Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739
| ||||| | ||| | | |||||||| |||| | | ||||||| || |||
Sbjct 77188 ATGTACTGGCACATTAAGTTGGAGTTCATACCAAGAAGAGCGCAAGGAAGAGCGTCAGTC 77247
Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCT-GTGCCA 251794
| ||| || || || |||| || || ||| | | || | |||| |||| | |
Sbjct 77248 AGGAACTCTTTCTCAATGGCGACAGCTTCCACGATAA-CGTCTTCCACAACCTGGGGGTC 77306
Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCT 251854
| ||| | ||||| ||| | ||| | ||||| |||| | ||| |||||||
Sbjct 77307 GGGAC-GGTTGTT---CAGGTGCGAGAAGAGGAGACAAGCAAAGTCAGTGTGGAGACCCT 77362
Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914
| || ||| ||||| ||||||||| | || || ||||||| ||||| ||| | |
Sbjct 77363 CATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAAGCCACGCTTCTTCA 77422
Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||||||| | | || ||||||||||| | | |||||| |||
Sbjct 77423 GCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATACCCTCAACA 77469
>seq2
Length=1180943
Score = 114 bits (126), Expect = 3e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||||||||| |||| ||||| || || ||||||| ||||| ||||| |||
Sbjct 592471 GGTGAGGATCTGTGCAACTGCACATTCTCCCTGGCCTATGGTGCCAAGATCCTGCTGAAC 592412
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| |||| | | |||||||| | || || ||||| |||||||||| || |
Sbjct 592411 CAGACCCACCTCCGCTTGAAGCGTGGTCAGCGTTACGGTCTTCTCGGTCCCAACGGTACC 592352
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
||||||| ||| || ||||| || || |||| ||||| || || || || ||
Sbjct 592351 GGTAAGACCACCCTTATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 592292
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||| | ||| || || || ||||||||| | || ||
Sbjct 592291 GATGAGGTCAAGACCGTCTACGTTGAGCACGACTTGGATTC 592251
Score = 84.2 bits (92), Expect = 4e-11
Identities = 92/120 (77%), Gaps = 2/120 (2%)
Strand=Plus/Minus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
|||||||| || || ||||| || ||||| ||| ||||| | ||| | | || ||
Sbjct 591064 CACTCTCGTATGCGTGGTCTCTCCGGAGGTCAGCGTGTCAAGGTCGTCCTTGCCGCCTGC 591005
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
||| ||||| | |||||||| ||||| || ||||||||||||||||| || ||||| ||
Sbjct 591004 TCT-TGGCAGCGTCCTCACGTCATCGTCCTGGACGAGCCTACCAACTACCTCGACCGTGA 590946
Score = 84.2 bits (92), Expect = 4e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764
|| || |||||||||||||||||||||||||| | || ||| || | | | |||
Sbjct 592108 CTCTCTGGTGGTTGGAAGATGAAGCTGGCCCTTGCCCGTGCCGTTTTCGAGAAGCCTGAT 592049
Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
|||| || || |||||||| ||||||||| ||||| || ||||| ||||||
Sbjct 592048 ATCCTGCTTCTGGATGAGCCTACCAACCACTTGGACGTCAAGAACGTTGCCTGG 591995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027830873878450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |