Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq110 131 3e-25 seq2 114 3e-20 >seq110 Length=120091 Score = 131 bits (144), Expect = 3e-25 Identities = 277/407 (68%), Gaps = 16/407 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || | || ||||| ||||||||||| |||||||| ||| Sbjct 77071 TCGAAGAAGTTGGTCTTACCAGCTAGGGAGATGTTGTCCATGAAGTCAAAGGGGTTGGTG 77130 Query 251623 GCATT---GTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 || || ||||| |||| | |||||| || || | || ||||| || || ||||| Sbjct 77131 GCGTTGAAGTACTTCTTG---TTGCCAAGGGCGACCAGGAGACGGTCGGCGACGAACTCA 77187 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | ||||| | ||| | | |||||||| |||| | | ||||||| || ||| Sbjct 77188 ATGTACTGGCACATTAAGTTGGAGTTCATACCAAGAAGAGCGCAAGGAAGAGCGTCAGTC 77247 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCT-GTGCCA 251794 | ||| || || || |||| || || ||| | | || | |||| |||| | | Sbjct 77248 AGGAACTCTTTCTCAATGGCGACAGCTTCCACGATAA-CGTCTTCCACAACCTGGGGGTC 77306 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCT 251854 | ||| | ||||| ||| | ||| | ||||| |||| | ||| ||||||| Sbjct 77307 GGGAC-GGTTGTT---CAGGTGCGAGAAGAGGAGACAAGCAAAGTCAGTGTGGAGACCCT 77362 Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914 | || ||| ||||| ||||||||| | || || ||||||| ||||| ||| | | Sbjct 77363 CATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATCAAGCCACGCTTCTTCA 77422 Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||||| | | || ||||||||||| | | |||||| ||| Sbjct 77423 GCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATACCCTCAACA 77469 >seq2 Length=1180943 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| || || ||||||| ||||| ||||| ||| Sbjct 592471 GGTGAGGATCTGTGCAACTGCACATTCTCCCTGGCCTATGGTGCCAAGATCCTGCTGAAC 592412 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| |||| | | |||||||| | || || ||||| |||||||||| || | Sbjct 592411 CAGACCCACCTCCGCTTGAAGCGTGGTCAGCGTTACGGTCTTCTCGGTCCCAACGGTACC 592352 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| || || |||| ||||| || || || || || Sbjct 592351 GGTAAGACCACCCTTATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 592292 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || ||||||||| | || || Sbjct 592291 GATGAGGTCAAGACCGTCTACGTTGAGCACGACTTGGATTC 592251 Score = 84.2 bits (92), Expect = 4e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 |||||||| || || ||||| || ||||| ||| ||||| | ||| | | || || Sbjct 591064 CACTCTCGTATGCGTGGTCTCTCCGGAGGTCAGCGTGTCAAGGTCGTCCTTGCCGCCTGC 591005 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 ||| ||||| | |||||||| ||||| || ||||||||||||||||| || ||||| || Sbjct 591004 TCT-TGGCAGCGTCCTCACGTCATCGTCCTGGACGAGCCTACCAACTACCTCGACCGTGA 590946 Score = 84.2 bits (92), Expect = 4e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || || |||||||||||||||||||||||||| | || ||| || | | | ||| Sbjct 592108 CTCTCTGGTGGTTGGAAGATGAAGCTGGCCCTTGCCCGTGCCGTTTTCGAGAAGCCTGAT 592049 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 |||| || || |||||||| ||||||||| ||||| || ||||| |||||| Sbjct 592048 ATCCTGCTTCTGGATGAGCCTACCAACCACTTGGACGTCAAGAACGTTGCCTGG 591995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830873878450