Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq77 179 7e-40 seq110 138 2e-27 seq11 138 2e-27 seq2 125 1e-23 >seq77 Length=177937 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| | || ||||| ||||||||||| || || || Sbjct 158513 CCACCACGAAGACGAAGGACCAAGTGCAATGTAGACTCCTTTTGGATGTTGTAGTCAGAC 158454 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| |||||||| ||||| | || ||||| || ||| Sbjct 158453 AGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGA 158394 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||||||||||| ||| || ||||| ||||| | ||||| || Sbjct 158393 ATTCCCTCCTTATCTTGAATCTTTGACTTCACATTGTCGATTGTGTCGGACGATTCAACC 158334 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 158333 TCCAGTGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 158287 Score = 179 bits (198), Expect = 7e-40 Identities = 180/234 (77%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||||||||| || || || |||| |||| || | ||| ||| || |||||||| || Sbjct 158748 TTAATTTCCACCACGGAGACGCAGGACCAGATGCAAGGTGCTCTCCTTCTGGATGTTGTA 158689 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||||||||||| | ||||| |||| ||| || || || || || || | ||| ||||| Sbjct 158688 GTCGGAGAGTGTGCGTCCATCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGCTGGTC 158629 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || ||||| ||||||||||||||||||| ||||||| ||||| ||||| | Sbjct 158628 AGGGGGGATGCCCTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATAGTGTCCGAGCT 158569 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| |||||||| || || ||||| |||||||| || |||||||| Sbjct 158568 CTCAACTTCCAAAGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 158515 Score = 141 bits (156), Expect = 2e-28 Identities = 166/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || | ||||| |||||||| || || || || || || || || || ||||| Sbjct 158285 CCACCACGCAAGCGCAGAACCAAGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCGGAC 158226 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | | || |||||||| ||| Sbjct 158225 AGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCGGGAGGA 158166 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 |||||||||||||| || ||||| |||||| |||||||| || ||| || || || Sbjct 158165 ATGCCTTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATGGTATC-GCTCGACTCGAC 158107 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATAT 68455 || | |||||| || ||||| ||||||||||| |||| ||| Sbjct 158106 CTCAAGGGTGATAGTCTTTCCTGTGAGGGTCTTCACGACTAT 158065 Score = 140 bits (154), Expect = 6e-28 Identities = 156/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| || | || | ||| || |||||||| || ||||||||||| |||| Sbjct 157989 TTCCACCACGAAGACGAAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGG 157930 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | ||||| || | |||||| || ||||| || | | || ||||| || | Sbjct 157929 AGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAG 157870 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411 ||||||||||||| || |||||||| |||||| ||||| ||||| ||| || || Sbjct 157869 GAATGCCTTCCTTATCCTGAATCTTGCTTTTGACGTTGTCGATAGTGTC-GCTGGACTCG 157811 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGT 68437 || ||||| |||||||| || || || Sbjct 157810 ACCTCCAAAGTGATGGTCTTGCCGGT 157785 >seq110 Length=120091 Score = 138 bits (152), Expect = 2e-27 Identities = 299/442 (68%), Gaps = 14/442 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||| || || ||||||||||| || || || |||||||||||||| ||| || | Sbjct 77034 CATCACACCAGCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCAGC 77093 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||||||||||| |||| || | ||| || || Sbjct 77094 TAGGGAGATGTTGTCCATGAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCC 77153 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || || | | ||||| || |||||||| |||||||||| ||| | || ||||| Sbjct 77154 AAGGGCGACCAGGAGACGGTCGGCGACGAACTCAATGTACTGGCACATTAAGTTGGAGTT 77213 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 ||| |||| | ||| || | ||||| | ||| || || || ||||||| || Sbjct 77214 CATACCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGGAACTCTTTCTCAATGGCGACAGC 77273 Query 10175 TTCCTCGACGATGCTCTT-TACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTTCG 10227 |||| ||| | | |||| || || ||| ||||| | |||||| || | || Sbjct 77274 TTCCACGATAACG-TCTTCCACAACCTGGGGGTC--GGGAC-GGTTGTTC---AGGTGCG 77326 Query 10228 AATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGG 10287 | | ||||| |||| | |||||| ||||| || || ||||| |||||||| Sbjct 77327 AGAAGAGGAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGG 77386 Query 10288 ACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACC 10347 | || ||||||||||| | || || || ||||||||| || | | ||| || | Sbjct 77387 AGAAGGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATC 77446 Query 10348 CGGAGAACAGAAGACCCTCCAC 10369 | ||||| | | |||||| || Sbjct 77447 CAGAGAAGAAGATACCCTCAAC 77468 >seq11 Length=432242 Score = 138 bits (152), Expect = 2e-27 Identities = 140/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 174886 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 174827 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || |||||||| || || || |||||||| || ||||| ||||||||| ||| Sbjct 174826 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 174767 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || |||||||||||||||||||| Sbjct 174766 ATGGTGTC-GCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 174708 >seq2 Length=1180943 Score = 125 bits (138), Expect = 1e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225778 GTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCC 225837 |||||| || ||||| || ||| || || | | |||||| ||||| ||||| | Sbjct 592259 GTCGTGCTCAACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTC 592318 Query 225838 ATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTA 225897 || || ||||| | ||||| |||| || | ||||||||||||| || ||||| Sbjct 592319 GTTGTTGATAGCACGCATAAGGGTGGTCTTACCGGTACCGTTGGGACCGAGAAGACCGTA 592378 Query 225898 ATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGC 225957 | | | || ||||| | | |||| | || |||||| ||||||||| |||||||||| Sbjct 592379 ACGCTGACCACGCTTCAAGCGGAGGTGGGTCTGGTTCAGCAGGATCTTGGCACCATAGGC 592438 Query 225958 AAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 |||||||| ||| | |||||| |||||||||||||| Sbjct 592439 CAGGGAGAATGTGCAGTTGCACAGATCCTCACCCTCCTC 592477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617215874000