Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq110 192 1e-43 seq56 145 1e-29 >seq110 Length=120091 Score = 192 bits (212), Expect = 1e-43 Identities = 347/504 (69%), Gaps = 9/504 (2%) Strand=Plus/Minus Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704 |||||||| || ||||| || |||||| || | || | || || ||| || | Sbjct 77546 AAGAAGGCCGATTGGGCTATCCGCTGGATTCAGGATAAAGAGTCGACCTTTGGCCAGCGT 77487 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || |||||| |||| || ||||| ||||||||||| || | |||||||| |||||| Sbjct 77486 CTTGTGGCCTTTGCCGCTGTTGAGGGTATCTTCTTCTCTGGATCTTTCGCCTCTATCTTC 77427 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | ||||||||| || |||||||| ||||| |||||| | Sbjct 77426 TGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGT 77367 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 || ||||| || || | |||||||| || ||||| |||||| ||||| | |||| Sbjct 77366 GATGAGGGTCTCCACACTGACTTTGCTTGTCTCCTCTTCTCG---CACCT---GAACAAC 77313 Query 42885 C-CCTCGAAGGAGCGGGTCCGG--GCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAG 42941 | | ||| || | || | | | ||| ||| || || | || ||||| ||| Sbjct 77312 CGTCCCGACCCCCAGGTTGTGGAAGACGTTATCGTGGAAGCTGTCGCCATTGAGAAAGAG 77253 Query 42942 TTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAG 43001 ||||| || | | || || | || | || |||||| | || | |||||| || Sbjct 77252 TTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGTATGAACTCCAACTTAATGTGCCAG 77193 Query 43002 TACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAAC 43061 ||||| ||| ||||||||||| ||||||| | | || || || |||| Sbjct 77192 TACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCCCTTGGCAACAAGAAGTACTTCAAC 77133 Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 | | |||||| ||||| ||||| |||||||| | | || ||||||||||| ||| Sbjct 77132 GCCACCAACCCCTTTGACTTCATGGACAACATCTCCCTAGCTGGTAAGACCAACTTCTTC 77073 Query 43122 GAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| || | ||||||||| Sbjct 77072 GAGAAGCGTGTTGGTGACTACCAG 77049 >seq56 Length=212660 Score = 145 bits (160), Expect = 1e-29 Identities = 323/475 (68%), Gaps = 10/475 (2%) Strand=Plus/Plus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 || || | |||| ||||||||||| | | | |||| || |||||| | ||| || || Sbjct 98072 GGACAGAAGAGAGTCCACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTC 98131 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGC 245089 |||||||| | |||||| || | | ||| || ||| ||| |||||| | || Sbjct 98132 CAGAGGGCATAGAAGAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGA 98191 Query 245090 TCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGC 245149 || | || || || || ||| ||||||| || |||| ||||| || | || || || Sbjct 98192 TCAAGGAATTCGAAAACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGA 98251 Query 245150 CGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAG 245207 |||||||| ||||||||||| | ||| ||| | || | |||||| | || || ||| Sbjct 98252 CGCTTGTTTCCTCCCTGGTCTA-CAT-ATCTGGCAGTGTTGTTGAACACCCGGAGCATAG 98309 Query 245208 GCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCC-CTTGCCC--CTGA 245264 | || || || || ||| || ||||| || ||||||| ||| | || | || Sbjct 98310 GAACAATACCATTGGAGGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGC 98369 Query 245265 GGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGA 245324 || ||| || | | ||| | ||| || ||| ||||||||| | || || |||||| Sbjct 98370 GG-TGCACATTG--AGGCCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGA 98426 Query 245325 TGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACA 245384 |||||| || || || ||||| ||| |||||| | || || ||||| || | | Sbjct 98427 GGGTGTCATAAATACCTTCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAA 98486 Query 245385 GCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||| |||| ||| | | | ||||||| || ||| ||| ||||| || || Sbjct 98487 GCTGAGGCTGAGGGGTACCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATA 98541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333888092000