Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19]
450 sequences; 37,474,605 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq56 109 6e-19
>seq56
Length=212660
Score = 109 bits (120), Expect = 6e-19
Identities = 357/550 (65%), Gaps = 6/550 (1%)
Strand=Plus/Plus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
||| |||||||| ||||| |||| | || || || || |||||||| | | |
Sbjct 98026 CTCGAATTCATCACCATAAACATCGGCCAAGCCGGGGGCCTCGTTAGGACAGAAGAGAGT 98085
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA-A 48243
||| || | | || || | |||| || | || || |||| || || ||| |
Sbjct 98086 CCACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGA 98144
Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303
| | ||| | || ||| | ||| || || ||| ||| | || ||||| || || |
Sbjct 98145 AGAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGATCAAGGAATTCGA 98204
Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363
| ||| || ||||| ||||| || || || || | ||||||| || || || ||||
Sbjct 98205 AAACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGACGCTTGTTTCCTC 98264
Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423
| || |||| |||||||||||| ||||| | || | | ||| || ||||||||||| |
Sbjct 98265 CCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTGG 98324
Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAAT 48481
| |||||||| || ||| || || |||| | || | | |||| |
Sbjct 98325 AGGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGGTGCACATTG--AG 98382
Query 48482 ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCC 48541
|| || ||||| || | || || || | ||||| || ||||| |||||||| ||
Sbjct 98383 GCCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGAGGGTGTCATAAATACC 98442
Query 48542 TTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGT 48601
||| || ||||| || |||||| | || || || || | || || ||| ||
Sbjct 98443 TTCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGT 98502
Query 48602 TCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATA 48661
|| | ||| || || || || || ||||| | || | |||| || | ||| | |||
Sbjct 98503 ACCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATA 98562
Query 48662 TGTTTCAATA 48671
|| || |||
Sbjct 98563 GGTCTCGATA 98572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562105638138000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |