Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq110 129 1e-24 seq56 100 5e-16 >seq110 Length=120091 Score = 129 bits (142), Expect = 1e-24 Identities = 296/440 (67%), Gaps = 13/440 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | |||||||| || Sbjct 77049 CTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCAGCTAGGGAGATGTTGTC 77108 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| |||||||||| | ||| | | | ||| ||| | |||| Sbjct 77109 CATGAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTT--GCCAAGGGCGACCAGG 77166 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | || |||||| |||| ||||| | |||| | | || |||||| || | || Sbjct 77167 AGACGGTCGGCGACGAACTCAATGTACTGGCACATTAAGTTGGAGTTCATACCAAGAAGA 77226 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA-- 48074 | || | ||| | || || ||||| ||||| || || |||||| | | || Sbjct 77227 GCGCAAGGAAGAGCGTCAGTCAGGAACTCTTTCTCAATGGCGACAGCTTCCACGATAACG 77286 Query 48075 TCTGCTT-AACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 ||| | ||| ||| || | | ||||| ||||||| | |||| | || Sbjct 77287 TCTTCCACAACCTGGGGGTCGGGACGGTTGTT---CAGGTGCGAGA---AGAGGAGACAA 77340 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || || || || ||||||| ||||||||||| ||||| Sbjct 77341 GCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCG 77400 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || || |||||||| || | |||||||| |||||||||||||| Sbjct 77401 GGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAGATA 77460 Query 48254 CCCTCCACTGCCGCGAACGC 48273 ||||| || || || || || Sbjct 77461 CCCTCAACAGCGGCAAAGGC 77480 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||| ||||| ||||||||| | || ||| | Sbjct 77687 TCTCGGAGTGGATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAACGAGCTTCAGGGA 77746 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||||| ||| | ||| | ||| ||||| || || || || || ||||| || |||| Sbjct 77747 TCTGCACCTCTCCGCTGAAACGCTCGAGCAGGTTTTCGTTTACAATGCCATCGGAGGCAG 77806 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGT 48587 |||||||||||||||| | | ||| | |||||||| Sbjct 77807 CAAAGAAGGCAAGGACGCGAGAGATGAAGTAGCGCTCGT 77845 >seq56 Length=212660 Score = 100 bits (110), Expect = 5e-16 Identities = 229/342 (67%), Gaps = 7/342 (2%) Strand=Plus/Plus Query 213780 GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACC 213839 ||||| | ||| |||| || |||| || || | || |||||||| |||||| | Sbjct 98072 GGACAGAAGAGAGTCCACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTC 98131 Query 213840 CACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGA 213899 || || || ||| || || | | ||| || ||| ||| ||| ||||| ||| Sbjct 98132 CAGAGGGCATAGAAGAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGA 98191 Query 213900 TCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGC 213959 || || || || || | || |||||||| || |||| |||||||||||| || || || Sbjct 98192 TCAAGGAATTCGAAAACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGA 98251 Query 213960 CTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGT 214016 | |||| || |||||||| || ||||| ||||||| | || || | || Sbjct 98252 CGCTTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGA 98311 Query 214017 ACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGT 214074 || | || ||||| ||| ||||| || | || || ||||||| || | | | Sbjct 98312 ACAATACCATTGGAGGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGG 98371 Query 214075 TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCA 214116 ||| ||| ||| || || ||||| ||| ||||||||||| Sbjct 98372 TGCACAT--TGAGGCCAATTCCACCCGCGGTCTTGGAGATCA 98411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527560128000