Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq99 98.7 6e-15 seq77 91.5 1e-12 >seq99 Length=134769 Score = 98.7 bits (108), Expect = 6e-15 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 ||||| | ||||| ||||| ||||||||||| | || ||||||||| | || || || Sbjct 87656 CGTCTCCGCACTGCCTGTGAGCGTGCTAAGCGTACACTCTCTTCTGCTGCCCAGACCTCT 87597 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 ||||| | |||||||| ||||| || ||||||| |||| || || | || Sbjct 87596 ATTGAAATCGATTCTCTCTTTGAGGGCATTGATTTCTATACCTCGATCACCCGTGCCCGT 87537 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 ||||| || |||| || ||||| | || || || |||||||| | || ||| Sbjct 87536 TTTGAGGAACTTTGCCAGGACCTCTTCCGCGGTACTATGGAGCCCGTTGAGCGTGTCCTC 87477 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725 | ||| |||| | ||||| || ||||| || ||||| || || || ||||| || Sbjct 87476 CGGGATGCTAAGATCGACAAGTCCTCTGTCCACGAGATTGTGCTGGTCGGTGGTTCTAC 87418 >seq77 Length=177937 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || ||||| || || ||||| ||||| || || ||||| |||||||| ||||| Sbjct 158442 ATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGGGAATTCCCTCCTT 158383 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 |||||||||||| || ||| || || || || | | | || || || || Sbjct 158382 ATCTTGAATCTTTGACTTCACATTGTCGATTGTGTCGGACGATTCAACCTCCAGTGTGAT 158323 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||||||||| |||||||| || Sbjct 158322 TGTCTTTCCAGTGAGAGTCTTGACGAAAATCTG 158290 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || || || |||||||| ||||||||||| || ||||| || || || ||||| Sbjct 158670 ATCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCCTCCTT 158611 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||||||||||||| ||||| || ||||| || | | | | || || ||| || | Sbjct 158610 GTCTTGAATCTTTGACTTGACGTTATCGATAGTGTCCGAGCTCTCAACTTCCAA-AGTGA 158552 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || ||||| ||||| || || || || Sbjct 158551 TGGTCTTGCCAGTGAGTGTCTTGACAAAGATCTG 158518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268159897316600