Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq103 122 1e-21 seq164 109 7e-18 seq110 100 3e-15 >seq103 Length=131974 Score = 122 bits (134), Expect = 1e-21 Identities = 123/158 (78%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||| ||||| ||||||||| ||||||||||| | || ||||||||| Sbjct 93540 GACAGCATCGGCGGTACGGTAACGTGCGTGATCCGCAACGTGCCCGTTGGACTCGGCGAG 93599 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || || || |||||| |||| ||| ||| || ||||||||||| || || || || Sbjct 93600 CCCTGTTTCGACAAGCTCGAAGCCAAGCTTGCGCACGCCATGCTCAGCATACCCGCAACA 93659 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTTT--GCGGGTGCG 19202 ||||| ||||| || ||| |||| || |||| |||| Sbjct 93660 AAGGGCTTCGAAATCGGC-TCGGGCTTCGGCGGTTGCG 93696 >seq164 Length=55711 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| ||||||||| || || ||| | || |||||| | || || || Sbjct 2133 GCCGCCAACTACCTTGACATCAAGGGACTACTTGATGTCGGCTGCAAGACCGTTGCAAAT 2192 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||||||||| |||||||| || ||||| || || ||| || ||| Sbjct 2193 ATGATCAAGGGCAAGTCGCCTGAGGAGATTCGAAAGACTTTCAATATCCAGAACG 2247 >seq110 Length=120091 Score = 100 bits (110), Expect = 3e-15 Identities = 168/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| || | || ||||| Sbjct 77044 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTACCAGCTAGGGAGATG 77103 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | || ||||||| | ||| ||| ||| | | || || | | Sbjct 77104 TTGTCCATGAAGTCAAAGGGGTTGGTGGCGTTGAAGTACTTCTTGTTGCCAAGGGCGACC 77163 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GA 868868 || || ||||||||||| ||||| |||||||||||||| | | || |||||| || || Sbjct 77164 AGGAGACGGTCGGCGACGAACTCAATGTACTGGCACATTAAGTTGGAGTTCATACCAAGA 77223 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| | || || | || ||| ||||||||||| || |||| || || |||| Sbjct 77224 AGAGCGCAA--GGAAGAGCGTCAGTCAGGAACTCTTTCTCAATGGCGACAGCTTCCACGA 77281 Query 868929 T 868929 | Sbjct 77282 T 77282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107102270892650