Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 4e-12 seq167 87.8 1e-11 >seq5 Length=594582 Score = 89.7 bits (98), Expect = 4e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 ||| ||||||||||| | |||||||||||||| ||| ||||| |||||||| | || || Sbjct 515632 TGAGTTTTTCTTCCACGCCATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 515691 Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAG 435228 || || ||||| |||||||| |||| || || ||| Sbjct 515692 CGCAGAAACTGGCTATATTCAGCGAAAGCTGGTTAAG 515728 >seq167 Length=54430 Score = 87.8 bits (96), Expect = 1e-11 Identities = 141/202 (70%), Gaps = 7/202 (3%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334 ||||| ||| |||||||| | |||| | ||||| ||||| ||| ||||| || || Sbjct 19028 ACATCGAAGGTACCACCACCGAGATCATAGATAAGGACATTGCGTTCCTTGTC--GGATT 18971 Query 282335 TT-----ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389 || | ||||||| || |||| ||||||||||| ||||| || || || | | | Sbjct 18970 TTCCAGAACCAAGACCGTAGGCAATGGCAGCAGCAGTGGGTTCGTTGATGATACGAAGGA 18911 Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449 | |||||||| | || || ||||| || || ||||| | ||| ||||| || | Sbjct 18910 CGTTAAGACCGGAGATAGCGCCGGCATCCTTGGTCGCTTGACGTTGGTTGTCGTTGAAGT 18851 Query 282450 ATGCAGGAACAGTAATAACGGC 282471 | || || ||||| | ||| || Sbjct 18850 AGGCTGGCACAGTGACAACCGC 18829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740608306901700