Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19]
450 sequences; 37,474,605 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 4e-12
seq167 87.8 1e-11
>seq5
Length=594582
Score = 89.7 bits (98), Expect = 4e-12
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191
||| ||||||||||| | |||||||||||||| ||| ||||| |||||||| | || ||
Sbjct 515632 TGAGTTTTTCTTCCACGCCATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 515691
Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAG 435228
|| || ||||| |||||||| |||| || || |||
Sbjct 515692 CGCAGAAACTGGCTATATTCAGCGAAAGCTGGTTAAG 515728
>seq167
Length=54430
Score = 87.8 bits (96), Expect = 1e-11
Identities = 141/202 (70%), Gaps = 7/202 (3%)
Strand=Plus/Minus
Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 282334
||||| ||| |||||||| | |||| | ||||| ||||| ||| ||||| || ||
Sbjct 19028 ACATCGAAGGTACCACCACCGAGATCATAGATAAGGACATTGCGTTCCTTGTC--GGATT 18971
Query 282335 TT-----ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 282389
|| | ||||||| || |||| ||||||||||| ||||| || || || | | |
Sbjct 18970 TTCCAGAACCAAGACCGTAGGCAATGGCAGCAGCAGTGGGTTCGTTGATGATACGAAGGA 18911
Query 282390 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 282449
| |||||||| | || || ||||| || || ||||| | ||| ||||| || |
Sbjct 18910 CGTTAAGACCGGAGATAGCGCCGGCATCCTTGGTCGCTTGACGTTGGTTGTCGTTGAAGT 18851
Query 282450 ATGCAGGAACAGTAATAACGGC 282471
| || || ||||| | ||| ||
Sbjct 18850 AGGCTGGCACAGTGACAACCGC 18829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740608306901700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |