Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq77 122 2e-22 >seq77 Length=177937 Score = 122 bits (134), Expect = 2e-22 Identities = 163/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| |||||||| ||||| ||||||||||| ||||| ||||| || || | Sbjct 158287 TACCACCACGCAAGCGCAGAACCAAGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCGG 158228 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || || || || ||||| ||||| | | || || || |||| Sbjct 158227 ACAGAGTACGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCGGGAG 158168 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || |||||||| || || ||| ||||| || ||||| || || ||||| | | || Sbjct 158167 GAATGCCTTCCTTGTCCTGGATC-TTGCTCTTGACATTATCGATGGTATCGCTCGACTCG 158109 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATAT 82804 || || | || || ||||| ||||| | ||||| || | ||| Sbjct 158108 ACCTCAAGGGTGATAGTCTTTCCTGTGAGGGTCTTCACGACTAT 158065 Score = 118 bits (130), Expect = 2e-21 Identities = 143/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || ||||| || || || || || || | | || || ||||| ||||| ||||||||| Sbjct 158705 TCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGTCCATCCTCTAGCTGTTTACCAGCAAAG 158646 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || || | ||| || || || || || || ||||| ||||||||||||| || || || Sbjct 158645 ATAAGACGTTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGAATCTTTGACTTGACGTTA 158586 Query 82740 TCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 || || || || || | || ||||||||||| || |||||||| || | ||||| || Sbjct 158585 TCGATAGTGTCCG-AGCTCTCAACTTCCAAAGTGATGGTCTTGCCAGTGAGTGTCTTGAC 158527 Query 82799 AAATATCTGCAT 82810 ||| |||||||| Sbjct 158526 AAAGATCTGCAT 158515 Score = 116 bits (128), Expect = 7e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||||| ||||| || || || || || || |||| Sbjct 158515 TACCACCACGAAGACGAAGGACCAAGTGCAATGTAGACTCCTTTTGGATGTTGTAGTCAG 158456 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||| || || || || || || || || | || || || || | Sbjct 158455 ACAGGGTGCGACCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGGG 158396 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||||||||||||||||| || ||||| || || || || | ||| | Sbjct 158395 GAATTCCCTCCTTATCTTGAATCTTTGACTTCACATTGTCGATTGTGTCGGACGATTCAA 158336 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || ||||| || || | ||||| || || |||||||| Sbjct 158335 CCTCCAGTGTGATTGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 158287 Score = 102 bits (112), Expect = 2e-16 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||| || || || || ||||| || ||||| || || || | | || Sbjct 157976 ACGAAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTACGGCC 157917 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| ||||| | | || || || ||||| || |||||||| Sbjct 157916 ATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCTTCCTT 157857 Query 82715 ATCTTGAATCTTTGCTTTT-ACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 ||| |||||| |||||||| || || || || || || | | || || |||||||| | Sbjct 157856 ATCCTGAATC-TTGCTTTTGACGTTGTCGATAGTGTCGCTGGACTCGACCTCCAAAGTGA 157798 Query 82774 TCGTCTTGCCTGT 82786 | |||||||| || Sbjct 157797 TGGTCTTGCCGGT 157785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981821539152550