Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq56 161 1e-34 seq110 89.7 7e-13 >seq56 Length=212660 Score = 161 bits (178), Expect = 1e-34 Identities = 608/939 (65%), Gaps = 26/939 (3%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||||||||| || ||||||| |||| || || || || ||||| | | | | Sbjct 98027 TCGAATTCATCACCATAAACATCGGCCAAGCCGGGGGCCTCGTTAGGACAGAAGAGAGTC 98086 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 ||| | | | | | ||| || ||||| || | || ||| |||| || || ||| || Sbjct 98087 CACTCGCCGTTGGCTTCAACCCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 98145 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||||| | | ||| ||| || || || || || ||||| || || || | Sbjct 98146 GAGATCACGAGCTCTCACTTCCTCCTTACCATGGTTCTTGCGGAGATCAAGGAATTCGAA 98205 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 || ||| | ||||| ||||| | || || || | | || || || || |||||||| Sbjct 98206 AACATCGGCGTGCCAAGGTTCCAAGTAGATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 98265 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| |||| |||||||||||||| || | || | ||||| |||| ||||||||| || Sbjct 98266 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATAGGAACAATACCATTGGA 98325 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGA 69873 ||||| || ||| ||| || || | || ||||| | | || | || Sbjct 98326 GGATCCATTGGTACCACCAATGTAGGAGCCGGTAGCACGAATGCGGTGCACATTG--AGG 98383 Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933 || ||||| || || | || ||||| | |||||| || | |||||||| ||||| Sbjct 98384 CCAATTCCACCCGCGGTCTTGGAGATCAATGCACAAGTCTTGAGGGTGTCATAAATACCT 98443 Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 || |||||||| || |||| | | ||| || || || | ||| | || || Sbjct 98444 TCGATGCTATCCTCCTTCATATCGACAAGGAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 98503 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || || || || || || || ||||| | || | ||| | || | || Sbjct 98504 CCGGCATTGAACAAGGTCGGGGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 98563 Query 70054 GTTTCAATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACAT 70112 || || ||||| || || || || | |||||||| | || ||||||||||| | Sbjct 98564 GTCTCGATAGCCTTCTCAATGTCATTACCG-TGAATTCCAACAGCAACACGCATCAAAAG 98622 Query 70113 ATGCTGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 |||||||| |||| | ||| || || | || || || |||||| || || Sbjct 98623 GTGCTGAGGGCGTTCAGCAACCTTTCCATCA---ATCCGCAGCAAGTATGACCGCTCAAG 98679 Query 70170 AGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTT 70227 ||| || || || ||| ||||||| ||||| || | || || | |||| | || || Sbjct 98680 AGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCACGGTCATACACAATAGCTGAGTTG 98737 Query 70228 AGTTTATCCTTATATTTGGTAACTATATC---CATAACAGTAGGTGAGATAATCGGAGAT 70284 |||| || || ||| | | || || | | | | ||| || ||||| | Sbjct 98738 AGTTCGTCGGCATGTTTCATGATAATCTCGTACGTTTCCTT---TGATATCATCGGGGCA 98794 Query 70285 CGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGt 70344 | || ||| || || || | ||||| | ||| ||| || || |||| | Sbjct 98795 GGCTTCTTATTCTTTGGGTTGATATAGTGGTATAGGTCTGAGATAACCAGGGAAAATTGC 98854 Query 70345 ttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404 || || |||| |||||| | || || | ||||| | || || ||||| || ||||| Sbjct 98855 TTCTTCGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCT 98914 Query 70405 GGATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGC 70442 |||||| ||||| || ||| || || | || ||||| Sbjct 98915 GGATGTGTGGTAGT-CATGTATGCCGCAGTCTCAGCAGC 98952 >seq110 Length=120091 Score = 89.7 bits (98), Expect = 7e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || || |||||| || || |||||||| | | || | ||||| || || || || Sbjct 77338 CAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGA 77397 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || ||||| | |||||||| || ||||| || || | || ||||||||||| |||||| Sbjct 77398 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAAGATCCAGAGAAGAAG 77457 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || ||||| || ||||| Sbjct 77458 ATACCCTCAACAGCGGCAAAGGCCACAAG 77486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904936138000