Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq56 159 4e-34 seq83 93.3 5e-14 >seq56 Length=212660 Score = 159 bits (176), Expect = 4e-34 Identities = 407/610 (67%), Gaps = 16/610 (3%) Strand=Plus/Minus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACT---ACACGCGT 53236 |||||| | ||||| ||||| || || | || || |||||| | ||| | | | | Sbjct 98631 CCTCAGCACCTTTTGATGCGTGTTGCTGTTGGAATTCACGGTAATGACATTGAGAAGGCT 98572 Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296 || ||||| || |||| ||| || ||||| || || || ||| | || ||| || Sbjct 98571 ATC---GAGACCTATCACTTGATGTCTCAGAAGTATTTCACCCATGCCTCCCCGACCTTG 98515 Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356 ||||| || ||||| ||| |||||| | | |||||||| || | |||||||| Sbjct 98514 TTCAATGCCGGTACCCCTCAGCCTCAGCTTGCTTCATGCTTCCTTGTCGATATGAAGGAG 98455 Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416 || ||||| || || || || || |||||| ||||| ||||||||| || Sbjct 98454 GATAGCATCGAAGGTATTTATGACACCCTCAAGACTTGTGCATTGATCTCCAAGACCGCG 98395 Query 53417 GGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGAC 53475 ||||| || || || | ||| | | | ||||| | |||| | || || || Sbjct 98394 GGTGGAATTGGCCTCAATGTGCACCG-CATTCGTGCTACCGGCTCCTACATTGGTGGTAC 98336 Query 53476 GAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTA 53535 || || | || |||| || || ||||||||||| || ||||||||||| ||| | || Sbjct 98335 CAATGGATCCTCCAATGGTATTGTTCCTATGCTCCGGGTGTTCAACAACACTGCCAGATA 98276 Query 53536 CGTCAACCAGGGTGGTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGC 53594 || ||||||| || ||||| | ||| | | || ||||||||| | || || |||| Sbjct 98275 TGTAGACCAGGGAGGAAACAAGCGTCCAGGTG-CTTTTGCCATCTACTTGGAACCTTGGC 98217 Query 53595 ACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGT---GACGAAGAGATGC 53651 ||||||| || | || || || || || || ||| || ||| || |||| || | Sbjct 98216 ACGCCGATGTTTTCGAATTCCTTGATCTCCGCAAGAACCATGGTAAGGAGGAAGTGA-GA 98158 Query 53652 GCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGA 53711 ||| ||||| || || || || |||| ||||||| | |||||| | ||| || Sbjct 98157 GCT--CGTGATCTCTTCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGGGTTGAAG 98100 Query 53712 AGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACG 53771 ||| |||||| || | || || |||||| ||||||| | | ||| || | Sbjct 98099 CCAACGGCGAGTGGACTCTCTTCTGTCCTAACGAGGCCCCCGGCTTGGCCGATGTTTATG 98040 Query 53772 GTGAGGAGTT 53781 |||| || || Sbjct 98039 GTGATGAATT 98030 >seq83 Length=169160 Score = 93.3 bits (102), Expect = 5e-14 Identities = 237/353 (67%), Gaps = 6/353 (2%) Strand=Plus/Plus Query 152761 TGGAACATGTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATG 152820 || || | ||| | || ||| ||||| ||||| || || ||| ||||| ||||||||| Sbjct 130007 TGTAAAAAGTTAATGAGCAAACCCTTAATGTGAGAACCATCATGATCCTGATCGGTCATG 130066 Query 152821 ATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACC-CGTAGACCTTTCCATGTTGAAG 152879 ||||||| | || || ||||| |||| ||| || ||| | || || || | Sbjct 130067 ATCATCAAGTGTCCATAACGCAGCCCACG-GGTGTCCGTGTATTCTTTCTTGTGCTGCAA 130125 Query 152880 CCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGC 152939 || |||| || || | ||| || ||| | || | | | ||||| | |||||| Sbjct 130126 ACCAAGGAAGTTCTTAATGTTCTGAATTTCTGCGTTTTTCGAGATCTGTTCGAACGTGGC 130185 Query 152940 ATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTA- 152998 ||| || || ||| || ||||||| || || || || || || || | | |||| | Sbjct 130186 ATCGCGGACGTTGAGCAGCTTTCCTCGAAGGGGGAAAACACCAAAGAGATCGGGGCCGAC 130245 Query 152999 CAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCG 153058 || ||| | | ||||| || || || | || ||||||||||| || || | ||| || | Sbjct 130246 CACCGCAC-GGCCGGCCATGGCCAGACCCTTGGCCGAGTCACCTTCTGTCAGAATCAGTG 130304 Query 153059 TACAGTCGT-GAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGGG 153110 | || | | | | | || ||||||||| ||| || ||| |||||||| Sbjct 130305 TGCAATGATGGCCATCCTTG-GTACCGGCCTTGTTTGCATCGGTCAGCTTGGG 130356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212921910000