Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq216 125 6e-24 >seq216 Length=22672 Score = 125 bits (138), Expect = 6e-24 Identities = 231/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177 |||||||||||||| || ||||||||| | ||| ||||| | | | | || ||| Sbjct 5756 GGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATGCTTCAGCTTGTGCAC 5697 Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237 | | |||||| || ||||| || | |||||| | | ||| |||||| Sbjct 5696 AACCTCGGCCAGCTGGTCGACCCCTTGGCCTGTGTAGTCGGTTTTGGCGTCGACGTACTC 5637 Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297 || ||||| || | ||| |||||||||||||| || |||||||| || | || | ||| Sbjct 5636 GGCCCCGAAGTGTCGCCATTGGAACCCGTACACGGGACCCAGGTCGCCGACCTCGCGGTG 5577 Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 | | |||| ||| || | || || | | |||||| ||||||||||||| || || Sbjct 5576 GCCCAGGCCCACCTTATCGAGGAACTCGCGGCTGCCGTTGCCGTCCCAGATCTTGACGCC 5517 Query 30358 CTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30417 | || |||||| || ||| ||| | || || |||||| || ||||| | || Sbjct 5516 TTGGTCGGAGAGCGGTTGGGACGAGGTGCAACCGGAGATGAACCAGAGGAGCTCGGCGAC 5457 Query 30418 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 |||||| ||||| | |||||| || |||||||| Sbjct 5456 GACGGCGCGGAGGAAGACGCGCTTGGTGGTCAGGAGGGG 5418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406308171641400