Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq77 125 2e-23 seq11 98.7 2e-15 >seq77 Length=177937 Score = 125 bits (138), Expect = 2e-23 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || | ||| ||||| ||||| || || | |||||| |||| || ||| | ||||| Sbjct 158271 CAGAACCAAGTGAAGAGTAGATTCCTTCTGAATATTGTAGTCGGACAGAGTACGGCCATC 158212 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| ||||||||||| | || || |||||||| ||||| ||||||||||| Sbjct 158211 CTCGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTC 158152 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||| ||| |||||||| || | || || || | ||||| || Sbjct 158151 CTGGATCTTGCTCTTGACATTATCGATGGTATCGCTCGACTCGACCTCAAGGGTGATAGT 158092 Query 225681 CTTGCCCGT 225689 ||| || || Sbjct 158091 CTTTCCTGT 158083 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| || || | ||| || || |||| ||||| |||| | || Sbjct 158736 ACGGAGACGCAGGACCAGATGCAAGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGTGT 158677 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| |||||||| || ||||| |||||||| ||||| ||||| || || || || Sbjct 158676 GCGTCCATCCTCTAGCTGTTTACCAGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCC 158617 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| ||| || ||||| ||||| ||| | || || || || Sbjct 158616 CTCCTTGTCTTGAATCTTTGACTTGACGTTATCGATAGTGTCCGAGCTCTCAACTTCCAA 158557 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 158556 AGTGATGGTCTTGCCAGT 158539 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| || ||||| || || |||| || || |||| | || Sbjct 157982 ACGAAGACGAAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGT 157923 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| ||||||||||| | || || ||||| || ||||| || Sbjct 157922 ACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCAGGAGGAATGCC 157863 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || ||||| || || ||||| ||||| || || || || || Sbjct 157862 TTCCTTATCCTGAATCTTGCTTTTGACGTTGTCGATAGTGTCGCTGGACTCGACCTCCAA 157803 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 157802 AGTGATGGTCTTGCCGGT 157785 >seq11 Length=432242 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 174886 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 174827 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || ||||| |||||||| |||||||| ||| || ||| Sbjct 174826 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 174767 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| | || ||||| | || || ||||| ||||| Sbjct 174766 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGT 174723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192524324312300