Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20bombycis_20[genbank_20GCA_5F001792695.1_202016-10-19] 450 sequences; 37,474,605 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq77 150 4e-31 seq11 120 7e-22 >seq77 Length=177937 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| || ||||| || ||||| ||| || ||| Sbjct 158290 CAGATTTTCGTCAAGACTCTCACTGGAAAGACAATCACACTGGAGGTTGAATCGTCCGAC 158349 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||| || || || ||||| || || |||||||| Sbjct 158350 ACAATCGACAATGTGAAGTCAAAGATTCAAGATAAGGAGGGAATTCCCCCTGACCAGCAG 158409 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || |||||||| || |||||||||||||| | || || | || || ||| || Sbjct 158410 CGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGTCGCACCCTGTCTGACTACAACATC 158469 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || ||| |||| |||| Sbjct 158470 CAAAAGGAGTCTACATTGCA-CTTG 158493 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || ||||| | || || || ||||| ||| Sbjct 158518 CAGATCTTTGTCAAGACACTCACTGGCAAGACCATCACTTTGGAAGTTGAGAGCTCGGAC 158577 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||||||| ||||| || || ||||| || ||||||||| Sbjct 158578 ACTATCGATAACGTCAAGTCAAAGATTCAAGACAAGGAGGGCATCCCCCCTGACCAGCAA 158637 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || |||||||| || |||||| | || || |||| || ||| || Sbjct 158638 CGTCTTATCTTTGCTGGTAAACAGCTAGAGGATGGACGCACACTCTCCGACTACAACATC 158697 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||||| || Sbjct 158698 CAGAAGGAGAGCACCTTGCATCTGGT 158723 Score = 136 bits (150), Expect = 1e-26 Identities = 154/204 (75%), Gaps = 7/204 (3%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCA 177987 ||||||| || ||||||||||| || |||||||| ||||| || ||| || |||| Sbjct 158069 TCGTGAAGACCCTCACAGGAAAGACTATCACCCTTGAGGTCGAGTCGAGC---GATACCA 158125 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| || ||||| ||||| |||||||| ||||| || ||||| |||||||| || Sbjct 158126 TCGATAATGTCAAGAGCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGCT 158185 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | |||||||| || || |||||||| ||||| | ||||| |||| || || | || | Sbjct 158186 TGATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGTACTCTGTCCGACTACAATATTCAGA 158245 Query 178108 AAGAATCAACACTGCATCTTGTTT 178131 | ||||| || || || |||| || Sbjct 158246 AGGAATCTACTCTTCA-CTTGGTT 158268 Score = 120 bits (132), Expect = 7e-22 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || ||||| | ||||| || | ||||| ||||| ||||||||| Sbjct 157785 ACCGGCAAGACCATCACTTTGGAGGTCGAGTCCAGCGACACTATCGACAACGTCAAAAGC 157844 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||||||||| || ||||| || ||||| |||||||| || | |||||||| || || Sbjct 157845 AAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCTTGATCTTCGCTGGCAAG 157904 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 ||||| || ||||| | || || |||| |||||| |||| || || || || || || Sbjct 157905 CAGCTTGAGGATGGCCGTACCCTCTCCGACTATAACATCCAGAAGGAGTCCACCCTTCAC 157964 Query 178125 CTTGTT 178130 |||||| Sbjct 157965 CTTGTT 157970 >seq11 Length=432242 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || ||||| || || || || |||||||| || || ||| ||||| Sbjct 174707 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 174763 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 174764 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCG 174823 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || ||||| || ||||| | || || ||| || ||| |||| Sbjct 174824 TCTGATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 174883 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 174884 GAAGGTATGAA 174894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203724259737300