Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3 188 8e-43
>seq3
Length=4187442
Score = 188 bits (208), Expect = 8e-43
Identities = 593/906 (65%), Gaps = 26/906 (3%)
Strand=Plus/Plus
Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010
||||||||||| || | |||| |||| ||||| ||| | || || | | | |
Sbjct 1408295 TCAAACTCGTCGCCATAGACATCTGCCAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTC 1408354
Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069
|| || || | ||| || || ||||| || || || || |||||||||| ||| ||
Sbjct 1408355 CAATCACCATTGGCCTCGACACGCTTCATGAATAGGTCGGGGGTCCAAAGAGC-ATAGAA 1408413
Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129
|| || | || ||| |||||| ||||| ||||| || || | |||| | |
Sbjct 1408414 CAGGTCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 1408473
Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189
|| || | ||||| || || | ||| || | | | || || || |||||||||||
Sbjct 1408474 AACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCC 1408533
Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249
||||| | ||||||||||||||| || |||||| | ||| || | ||| || |||||
Sbjct 1408534 TTGATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGA 1408593
Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 54307
| |||||||| || ||| || |||| | ||||| || || ||| |||
Sbjct 1408594 CGATCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTG--AGA 1408651
Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367
|| ||||| || || | || || || | || || || || || || ||||| |||
Sbjct 1408652 CCAATCCCACCAGCAGTCTTTGAAATCATAGCACAGGTCTTCAATGTGTCGTAGATACCC 1408711
Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 54423
|| ||||| || ||| |||||| | || | ||| ||| | | ||| | ||
Sbjct 1408712 TCGATACTGTCTTCCTTCATGTCGACCAGGA---AGCAAGAAGCTAGCTGA-GGCTGGGG 1408767
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
||| |||||||| || | ||| || || ||||| || || | || | || | || ||
Sbjct 1408768 AGTACCCGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTT 1408827
Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATT 54541
|||||| ||||| ||| || |||| | ||| |||||| || || || ||||||||
Sbjct 1408828 GTACGTTTCGATGGCTCTCTCAATAT--CGTTGCCATGAATACCGACAGCAACACGCATC 1408885
Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601
| || |||||||| | || | | |||| ||| | ||| | ||| || ||
Sbjct 1408886 AGCAAATGCTGAGGACGCTCGGCAACCTTGCCGTTGAGACGCAGAAGGTATGACCGCTCA 1408945
Query 54602 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGT 54659
| || || ||||| ||| ||||||| ||||| || || ||||| | ||| | ||||
Sbjct 1408946 AGGGTCTTGAAACCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTAGACAATCGCAGAGT 1409003
Query 54660 TGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACT--TGAAATAATCGGAGA 54717
|||| | || || ||| | || | || || | || ||| || || || |
Sbjct 1409004 TGAGCTCGTCGGCATGTTTCATCACAATCTCGTACGT--TTCTTGTGATATCATAGGCGC 1409061
Query 54718 ATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAG 54777
| ||| ||| || || |||||||||| | | ||| || || ||| |
Sbjct 1409062 AGCCTTCTTATTCTTGGGGTTGACATAGTGGTAAAGATCTGAGATGACGAGGGAGAATTG 1409121
Query 54778 tttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATC 54837
|| || |||| ||||| || || || ||||| || | |||||| || ||||| || ||
Sbjct 1409122 CTTCTTGGTTTGCTTGTGGAGGTTCGACACGGCGATACGAGCGGCAAGGATGGCGTAGTC 1409181
Query 54838 CGGATG 54843
|| ||
Sbjct 1409182 TGGGTG 1409187
Score = 111 bits (122), Expect = 2e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| |||||||| ||| ||||||||||| | || | |||||||| || || ||
Sbjct 3256352 CAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGA 3256411
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|||||||| || |||||||| || ||||| || ||||| ||||| || ||||| |||||
Sbjct 3256412 CCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAG 3256471
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAG 24283
|| || || || || |||||||||| |||
Sbjct 3256472 ATACCCTCGACGGCAGCAAAGGCAACAAG 3256500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721021121440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |