Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3 129 1e-24 seq2 93.3 9e-14 >seq3 Length=4187442 Score = 129 bits (142), Expect = 1e-24 Identities = 432/660 (65%), Gaps = 23/660 (3%) Strand=Plus/Minus Query 248791 GCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAA 248850 ||||||| ||||| | ||||| | ||| | || || | |||||| || || ||| Sbjct 1408998 GCGATTGTCTACGACCGGGATTTCAACTACAACTTTTTCGGTTTCAAGACCCTTGAGCGG 1408939 Query 248851 TCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGA 248910 || || || || | | |||||| | | || || |||||| || ||||||| Sbjct 1408938 TCATACCTTCTGCGTCTCAACGGCAAGGTTGCCGAGCGTCCTCAGCATTTGCTGATGCGT 1408879 Query 248911 GTGGCTGTCGGGATTCA---CAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGA 248967 || |||||||| ||||| ||| ||| || ||||| | |||| ||||||| | Sbjct 1408878 GTTGCTGTCGGTATTCATGGCAACGAT---ATTGAGAGAGCCATCGAAACGTACAACCTG 1408822 Query 248968 ATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACCGTCAAC 249027 ||| | | | ||||| ||| | ||||| || ||||| || ||||| | | Sbjct 1408821 ATGTCCCAGAAGTTCTTCACACACGCCTCCCCGACCCTGTTCAATGCGGGTACTCCCCAG 1408762 Query 249028 AATCAGCTGAGCT-CGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTA 249086 |||||| |||| | ||||| || | | |||| | || ||| | |||| || || || Sbjct 1408761 CCTCAGCT-AGCTTCTTGCTTCCTGGTCGACATGAAGGAAGACAGTATCGAGGGTATCTA 1408703 Query 249087 TGACACGCTTAAACAGACG-GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCG 249145 ||||| || || | | || | |||||| || || || || || |||||| || Sbjct 1408702 CGACACA-TTGAAGACCTGTGCTATGATTTCAAAGACTGCTGGTGGGATTGGTCTCAACG 1408644 Query 249146 TCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTG--ATGG 249203 | | |||||| || | || || ||||||| ||||| ||||| || || | || Sbjct 1408643 TTCACCGCATCCGTGCTACTGGATCTTACATCAGTGGTACCAATGGA-TC-GTCCAACGG 1408586 Query 249204 TATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAG----GTTCATCAACCAGGC-- 249257 || | ||| | |||||| || | |||||| || ||| ||||| ||| Sbjct 1408585 AATTCTCCCCATGCTTCGAGTTTTCAACAACACCGCTAGATACGTTGATCAAGGAGGAAA 1408526 Query 249258 CGGGCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGA 249317 | ||| | ||| | || || || || | || ||||||||||| | || || Sbjct 1408525 CAAGCGTCC---GGGTGCCTTTGCTATCTACCTTGAGCCCTGGCACGCCGACGTTTTCGA 1408469 Query 249318 GTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTA 249377 |||| ||||| || |||||| |||| || ||| ||||||| |||||||| ||||| Sbjct 1408468 GTTCTTGGACCTGCGCAAGAACCACGGAAAGGAGGAAGTGAGAGCCCGTGACCTGTTCTA 1408409 Query 249378 CGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | || ||| | ||||| | |||||| || ||| ||||| | || |||||||| || Sbjct 1408408 TGCTCTTTGGACCCCCGACCTATTCATGAAGCGTGTCGAGGCCAATGGTGATTGGACCCT 1408349 >seq2 Length=4235893 Score = 93.3 bits (102), Expect = 9e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 254004 CCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTG 254063 || ||| | || || ||||||||||||| ||||| || || || || ||||||||||| Sbjct 3802036 CCACATCTCCTCCTCTACGGTCCTCCCGGCACAGGTAAAACATCCACAATCCTGGCGCTC 3802095 Query 254064 GCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCT 254123 |||||| | | ||| | ||||||| | || ||||||||||| || ||| | Sbjct 3802096 GCCCGACGAATATACGGCAACAAGAACATGCGGCAGATGGTGCTCGAGCTCAATGCTAGT 3802155 Query 254124 GACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 ||||| | || | ||||| ||||| || | ||||||||||| Sbjct 3802156 GACGATAGAGGAATTGACGTTGTCCGAGAGCAAATCAAGACTTT 3802199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765326904704