Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3 217 1e-51
seq5 93.3 4e-14
>seq3
Length=4187442
Score = 217 bits (240), Expect = 1e-51
Identities = 428/630 (68%), Gaps = 10/630 (2%)
Strand=Plus/Plus
Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411
|||| || || || || |||| ||||| |||||||| || ||||| | ||| ||||| |
Sbjct 1408380 TCATGAATAGGTCGGGGGTCCAAAGAGCATAGAACAGGTCACGGGCTCTCACTTCCTCCT 1408439
Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471
| ||| |||||| || ||||| || || || ||||| || ||||| ||||| ||||
Sbjct 1408440 TTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAAAACGTCGGCGTGCCAGGGCTCAAGGT 1408499
Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531
| | ||||| || ||||| | ||| || || || ||||| ||||| | || |||||||
Sbjct 1408500 AGATAGCAAAGGCACCCGGACGCTTGTTTCCTCCTTGATCAACGTATCTAGCGGTGTTGT 1408559
Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCC--TACGCCCGCCACACT 23589
|| | |||| ||||| || | | |||||||||| || ||| | | |
Sbjct 1408560 TGAAAACTCGAAGCATGGGGAGAATTCCGTTGGACGATCCATTGGTACCACTGATGTAA- 1408618
Query 23590 CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATAT 23649
|| || | || || | | |||||||| || ||| || || || | | || || ||
Sbjct 1408619 -GATCCAGTAGCACGGATGCGGTGAACGTTGAGACCAATCCCACCAGCAGTCTTTGAAAT 1408677
Query 23650 CATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGAC 23709
||| || || |||| ||||||||||| |||||||| ||||| || || | ||||
Sbjct 1408678 CATAGCACAGGTCTTCAATGTGTCGTAGATACCCTCGATACTGTCTTCCTTCATGTCGAC 1408737
Query 23710 CAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGC 23769
|| ||| || |||| | || | | ||| ||| | || |||||| |||||| |||
Sbjct 1408738 CAGGAAGCAAGAAGCTAGCTGAGGCTGGGGAGTACCCGCATTGAACAGGGTCGGGGAGGC 1408797
Query 23770 GTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTC 23829
||| || ||| | | ||||| || |||||||| |||||||| ||||| || |
Sbjct 1408798 GTGTGTGAAGAACTTCTGGGACATCAGGTTGTACGTTTCGATGGCTCTCTCAATATCGTT 1408857
Query 23830 TCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG---ACCGTGAC 23886
|| || ||||||| || || ||||||| || | ||||| | |||| ||| |
Sbjct 1408858 GCCATGAATACCGACAGCAACACGCATCAGCAAATGCTGAGGACGCTCGGCAACCTT--- 1408914
Query 23887 GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTT 23946
|||||| | | || ||||| || | | || || || || ||| ||| |||||
Sbjct 1408915 GCCGTTGAGACGCAGAAGGTATGACCGCTCAAGGGTCTTGAAACCGAAAAAGTTGTAGTT 1408974
Query 23947 AAAGTCACGATCGTGCACTATGGCCGAATT 23976
|| || || |||| || || || || ||
Sbjct 1408975 GAAATCCCGGTCGTAGACAATCGCAGAGTT 1409004
Score = 138 bits (152), Expect = 1e-27
Identities = 263/386 (68%), Gaps = 20/386 (5%)
Strand=Plus/Minus
Query 57914 CAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG--CCACGTTCGCCGAG 57971
||||||||| | ||| | ||||| ||||| | | ||| | |||| || || ||
Sbjct 3256561 CAAGAAGGCTCAATGGGCCATCAAGTGGATTCA--GGACCAGGAGTCCACCTTTGCTCAG 3256504
Query 57972 AGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATA 58031
| || | || || || |||||||| ||||| ||||| || ||| ||||| | ||
Sbjct 3256503 CGCCTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTTGCCTCCATC 3256444
Query 58032 TTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCG 58091
|| ||| ||||||| || || ||||||||||| || || || ||||||| | || ||
Sbjct 3256443 TTCTGGCTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCC 3256384
Query 58092 CGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAA 58151
|| |||||||||||||| |||||||| || ||||| | | ||||||| | ||
Sbjct 3256383 CGTGACGAGGGTCTCCACACTGATTTCGCCTGCCTGCTATTCTCTCAC-------CTCAA 3256331
Query 58152 CCGACGCGGGATCGCA--------TCTTGGACATTATCACCGAGGCGGTCGCGATCGAAA 58203
| | ||| | || | || |||||| ||| ||||| ||| | || ||||
Sbjct 3256330 CTGGCGCCCG-TCCAATAAGGTTGTCGAGGACATCATCGTTGAGGCCGTCTCTATTGAAA 3256272
Query 58204 ATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGT 58263
| ||||| |||| || || || || ||| | ||||| |||||| | | | ||||
Sbjct 3256271 AGGAGTTCCTCACGGATGCTCTCCCTTGCGCCCTCCTCGGCATGAACTCTAAGCTCATGT 3256212
Query 58264 CAAAGTACATTGAGTTTGTTGCCGAC 58289
||||||| ||||| || || |||
Sbjct 3256211 GCCAGTACATCGAGTTCGTCGCTGAC 3256186
>seq5
Length=3432170
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || |||||||| ||||| || || |||||| | || || || | |||
Sbjct 765077 ATGCAAATCTTTGTCAAGACTCTTACAGGAAAGACCATCACCTTGGAGGTGGAGTCATCC 765018
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | || || ||| ||| | | ||||||| || | || || || ||
Sbjct 765017 GACACAATCGACAACGTAAAGACAAAGATTCAAG-ACAAGGAGGGTATCCCTCCGGATCA 764959
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || |||||||| || || | ||||| | || | || || ||
Sbjct 764958 GCAGCGTCTCATTTTCGCTGGAAAGCAACTTGAAGATGGTCGCACACTCTCGGACTACAA 764899
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||| || ||||| || || || || || || | ||| | || ||||
Sbjct 764898 CATTCAGAAGGAATCCACGCTCCACCTTGTCCTCCGTCTGCGTGGTGGTA 764849
Score = 89.7 bits (98), Expect = 5e-13
Identities = 115/156 (74%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| || || || || |||||||| | || ||||| |||
Sbjct 764849 ATGCAGATTTTCGTCAAGACACTCACCGGAAAGACGATCACATTGGAGGTTGAGAGCTCC 764790
Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | || | ||||| || ||| | | | |||||||| | || || |||||
Sbjct 764789 GACACCATTGATAACGTCAAGACTAAGATTCAAG-ATAAGGAAGGAATTCCCCCAGACCA 764731
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||| ||||| || |||||||| || |||||||||||
Sbjct 764730 GCAACGTCTCATTTTCGCTGGTAAGCAGTTGGAAGA 764695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445765965377760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |