Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq3 159 4e-34 >seq3 Length=4187442 Score = 159 bits (176), Expect = 4e-34 Identities = 583/902 (65%), Gaps = 18/902 (2%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || |||||||| || | |||| |||| | ||| ||| | || || | | | | Sbjct 1408295 TCAAACTCGTCGCCATAGACATCTGCCAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTC 1408354 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || || | ||| || || ||||| || || || || |||||||||| ||| || Sbjct 1408355 CAATCACCATTGGCCTCGACACGCTTCATGAATAGGTCGGGGGTCCAAAGAGC-ATAGAA 1408413 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | ||| |||||| ||||| ||||| || || | |||| | | Sbjct 1408414 CAGGTCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 1408473 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 || || | ||||| || || | ||| || || | | || || || ||||||||||| Sbjct 1408474 AACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCC 1408533 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||||| | ||||||||||||||| || |||||| | ||| || | ||| ||||| || Sbjct 1408534 TTGATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGA 1408593 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA--TTGATAGA 63545 ||||||||||| ||| || |||| | ||||| || || ||| ||| Sbjct 1408594 CGATCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTG--AGA 1408651 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 || || || || || | || || || | || || || || ||||| ||||| || Sbjct 1408652 CCAATCCCACCAGCAGTCTTTGAAATCATAGCACAGGTCTTCAATGTGTCGTAGATACCC 1408711 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 || || || || || |||||| | || || || || | || | | | ||| Sbjct 1408712 TCGATACTGTCTTCCTTCATGTCGACCAGGAAGCAAGAAGCTAGCTGAGGCTGGGGAGTA 1408771 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 |||||||| || | ||| || || ||||| || || | || | || | || |||||| Sbjct 1408772 CCCGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTTGTAC 1408831 Query 63726 GTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACA 63783 || || || ||| || |||| | ||| |||||| || || || |||||||| | || Sbjct 1408832 GTTTCGATGGCTCTCTCAATAT--CGTTGCCATGAATACCGACAGCAACACGCATCAGCA 1408889 Query 63784 TGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63843 |||||||| | || ||| ||| ||| | || | ||| || || | | Sbjct 1408890 AATGCTGAGGACGCTCGGCAACCTTGCCGTTGAGACGCAGAAGGTATGACCGCTCAAGGG 1408949 Query 63844 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901 | || ||||| ||| ||||||| ||||| || || ||||| | ||| | || ||||| Sbjct 1408950 TCTTGAAACCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTAGACAATCGCAGAGTTGAG 1409007 Query 63902 CTTATCCTTATATTTGTTAACTATATCCATGGTAATACT--TGAAATAATCGGAGAATGT 63959 || || || ||| | || || || || | || ||| || || || | | Sbjct 1409008 CTCGTCGGCATGTTTCATCACAATCTCGTACGT--TTCTTGTGATATCATAGGCGCAGCC 1409065 Query 63960 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 64019 ||| ||| || || || ||||||| | | | ||| || || ||| | || Sbjct 1409066 TTCTTATTCTTGGGGTTGACATAGTGGTAAAGATCTGAGATGACGAGGGAGAATTGCTTC 1409125 Query 64020 tttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64079 || |||| |||||| || || || | ||| || | ||||| || ||||| || || || Sbjct 1409126 TTGGTTTGCTTGTGGAGGTTCGACACGGCGATACGAGCGGCAAGGATGGCGTAGTCTGGG 1409185 Query 64080 TG 64081 || Sbjct 1409186 TG 1409187 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || |||||||| ||| ||||||||||| | || | ||||| || || || || Sbjct 3256352 CAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGA 3256411 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || ||||| || || || || || |||||| Sbjct 3256412 CCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAG 3256471 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33730 || || || || ||||||||||||| ||| Sbjct 3256472 ATACCCTCGACGGCAGCAAAGGCAACAAG 3256500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816985927840