Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 1e-13
seq3 82.4 8e-11
>seq5
Length=3432170
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | || | ||||| ||||||||||| |||||||| || |||
Sbjct 765380 CCACCACGCAGACGAAGCACGAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAGTCGGAA 765439
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||| || |||||||| || || ||||||| ||||| ||||| || ||
Sbjct 765440 AGGGTACGGCCGTCCTCAAGCTGTTTGCCGGCGAAGATCAGGCGTTGTTGATCAGGGGGA 765499
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || || || ||| | || || || | | || | |||||| ||| ||| ||
Sbjct 765500 ATGCCCTCCTTATC-CTGAATCTTGGTCTTGACGTTATCGATGGTGTCGCTGGACTCGAC 765558
Query 139717 CTCAACGGTCACCGTCTTGCCGGT 139740
||||| ||| | |||||||| ||
Sbjct 765559 CTCAAGGGTGATGGTCTTGCCAGT 765582
>seq3
Length=4187442
Score = 82.4 bits (90), Expect = 8e-11
Identities = 153/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896
||||||||| |||||||| ||||| | ||||| ||| | || | | | |||
Sbjct 3256290 GAGGCCGTCTCTATTGAAAAGGAGTTCCTCACGGATGCTCTCCCTTGCGCCCTCCTCGGC 3256231
Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956
|||||| | | | |||||| ||||||||||||| || || ||| | ||| || |
Sbjct 3256230 ATGAACTCTAAGCTCATGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTTGCT 3256171
Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016
||||| | ||| |||| || || ||||||||| || ||| | ||| ||
Sbjct 3256170 CTCGGCAACAAGAAGTACTTCAACGCCACCAACCCCTTTGACTTCATGGAGTCCATTTCT 3256111
Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
|||| || || || ||||| ||||||| ||||| || || |||
Sbjct 3256110 CTCGCCGGTAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTAC 3256066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063516337600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |