Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 179 5e-40
>seq3
Length=4187442
Score = 179 bits (198), Expect = 5e-40
Identities = 591/906 (65%), Gaps = 26/906 (3%)
Strand=Plus/Plus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|| |||||||| || | ||||| | || ||||| ||||| ||| || | | | |
Sbjct 1408295 TCAAACTCGTCGCCATAGACATCTGCCAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTC 1408354
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979
|| || |||| ||| || || ||||| || || || || |||||||||| ||| ||
Sbjct 1408355 CAATCACCATTGGCCTCGACACGCTTCATGAATAGGTCGGGGGTCCAAAGAGC-ATAGAA 1408413
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039
|| || | || ||| ||||| ||||| ||||| || || | |||| | |
Sbjct 1408414 CAGGTCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 1408473
Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099
|| || | ||||| || || | ||| || || | | ||||| || |||||||||||
Sbjct 1408474 AACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCC 1408533
Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159
||||| | ||||||||||||||| || |||||| | ||| || | ||| || |||||
Sbjct 1408534 TTGATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGA 1408593
Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 80217
| |||||||| || ||| || |||| | ||||| || || ||| |||
Sbjct 1408594 CGATCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTG--AGA 1408651
Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277
|| || || || || | || || || | || || || || || || ||||| |||
Sbjct 1408652 CCAATCCCACCAGCAGTCTTTGAAATCATAGCACAGGTCTTCAATGTGTCGTAGATACCC 1408711
Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 80333
|| || || || || |||||| | || | ||| ||| | | ||| | ||
Sbjct 1408712 TCGATACTGTCTTCCTTCATGTCGACCAGGA---AGCAAGAAGCTAGCTGA-GGCTGGGG 1408767
Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393
||| |||||||| || | ||| || || ||||| || || | || | |||| || ||
Sbjct 1408768 AGTACCCGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTT 1408827
Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATT 80451
|||||| || || ||| || |||| | ||| |||||| || || || ||||||||
Sbjct 1408828 GTACGTTTCGATGGCTCTCTCAATAT--CGTTGCCATGAATACCGACAGCAACACGCATC 1408885
Query 80452 AACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCC 80511
| || |||||||| | || | | |||| || | || | ||| || ||
Sbjct 1408886 AGCAAATGCTGAGGACGCTCGGCAACCTTGCCGTTGAGACGCAGAAGGTATGACCGCTCA 1408945
Query 80512 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 80569
| || || ||||| ||| ||||||| ||||| || || ||||| | ||| | ||||
Sbjct 1408946 AGGGTCTTGAAACCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTAGACAATCGCAGAGT 1409003
Query 80570 TGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACT--TGAAATAATCGGAGA 80627
|||| | || || ||| | || | || || | || ||| || || || |
Sbjct 1409004 TGAGCTCGTCGGCATGTTTCATCACAATCTCGTACGT--TTCTTGTGATATCATAGGCGC 1409061
Query 80628 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 80687
| ||| ||| || || || ||||||| | | | ||| || || ||| |
Sbjct 1409062 AGCCTTCTTATTCTTGGGGTTGACATAGTGGTAAAGATCTGAGATGACGAGGGAGAATTG 1409121
Query 80688 tttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATC 80747
|| || |||| |||||| || || || ||||| || | ||||| | ||||| || ||
Sbjct 1409122 CTTCTTGGTTTGCTTGTGGAGGTTCGACACGGCGATACGAGCGGCAAGGATGGCGTAGTC 1409181
Query 80748 TGGATG 80753
||| ||
Sbjct 1409182 TGGGTG 1409187
Score = 129 bits (142), Expect = 8e-25
Identities = 156/212 (74%), Gaps = 3/212 (1%)
Strand=Plus/Plus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| |||||||| ||| ||||||||||| | || || |||||||| || || ||
Sbjct 3256352 CAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGA 3256411
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| || |||||||| || ||||| || ||||| ||||| || ||||| ||||||
Sbjct 3256412 CCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAG 3256471
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136
|| || || || || |||||||||||||| | || || | ||| | ||| ||
Sbjct 3256472 ATACCCTCGACGGCAGCAAAGGCAACAAGGCGCTGAGCAAAGGTGGACTCCTGGTCCTGA 3256531
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTT 50168
|||||||| ||||| | |||||||| ||
Sbjct 3256532 ATCCACTTGATGGCCCATTGAGCCTTCTTGTT 3256563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268099687920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |