Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 6e-11 >seq5 Length=3432170 Score = 82.4 bits (90), Expect = 6e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 42879 GTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATC 42938 || ||| ||||| || | | ||||| |||| ||||||||||| || | ||||| || Sbjct 764619 GTTGCCACCACGAAGGCGGAGGACCAAGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC 764678 Query 42939 GGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGC 42998 ||| | |||||| | || ||||| || || || || ||||| | || || || || | Sbjct 764679 GGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAAATGAGACGTTGCTGGTCTGG 764738 Query 42999 CGGCACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGC-C 43056 || | ||||| || || ||| | || ||||| | ||| |||||| ||| | Sbjct 764739 GGGAATTCCTTCCTTATCTTGAATCTTAGTC-TTGACGTTATCAATGGTGTCG-GAGCTC 764796 Query 43057 TCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || | || || || |||||||| || || || || ||||| ||||| Sbjct 764797 TCAACCTCCAATGTGATCGTCTTTCCGGTGAGTGTCTTGACGAAAATCTGCAT 764849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369237460524