Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 149 9e-31 >seq3 Length=4187442 Score = 149 bits (164), Expect = 9e-31 Identities = 335/496 (68%), Gaps = 23/496 (5%) Strand=Plus/Minus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||||||||||| || |||||| | ||| | |||| | | || | | Sbjct 3256560 AAGAAGGCTCAATGGGCCATCAAGTGGATTCAGGACCAGGAGTCCACCTTTGCTCAGCGC 3256501 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || || || ||||| ||||| |||||||| || || ||||| ||||||| Sbjct 3256500 CTTGTTGCCTTTGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCGTTTGCCTCCATCTTC 3256441 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || |||||||| || || | |||||| | || || || Sbjct 3256440 TGGCTGAAGAAGCGTGGTCTGATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCCCGT 3256381 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604 |||||||| || ||| ||| || ||| || || || || || || | ||| ||| Sbjct 3256380 GACGAGGGTCTCCACACTGATTTCGCCTGCCTGCTATTCTCTCACCTCAACTGGCGCCC- 3256322 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 || || || | | || ||| ||||| | || || ||||| || ||| Sbjct 3256321 -GTCCA-AT--AAGGTTGTCGAGGACATCATCGTT------GAGGCCGTCTCTATTGAAA 3256272 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 | ||||| || || || | || || | | | | |||||||||| ||||| |||| Sbjct 3256271 AGGAGTTCCTCACGGATGCTCTCCCTTGCGCCCTCCTCGGCATGAACTCTAAGCTCATGT 3256212 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAGAT 125782 || ||||||| ||||| || || || || || ||| |||| | ||| ||||| Sbjct 3256211 GCCAGTACATCGAGTTCGTCGCTGACCGCCTGCTG-----GTTGCTCTCGGCAACAAGAA 3256157 Query 125783 TTA---CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 || |||||||| || |||||||| |||||| ||| || || | |||||||| Sbjct 3256156 GTACTTCAACGCCACCAACCCCTTTGACTTCATGGAGTCCATTTCTCTCGCCGGTAAGAC 3256097 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 3256096 CAACTTCTTCGAGAAG 3256081 Score = 132 bits (146), Expect = 7e-26 Identities = 206/289 (71%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| | ||||| || ||||| | |||||| ||||||| Sbjct 3256958 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAAGAAATCGATCTC 3256899 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | ||| ||| || ||||| | || || || Sbjct 3256898 TCCAAGGACCTTCACGACTGGAACAACCGTCTGAACGACGACGAGCGCTACTTCATTTCC 3256839 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 | | | ||||||||||| || | || ||||| ||||||||||| || || |||| || Sbjct 3256838 CGCGTGTTGGCCTTCTTCGCTGCATCTGATGGCATCGTCAACGAGAACTTGCTTGA-GCG 3256780 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| | || || |||| ||| ||||| ||||| ||||| ||||||| Sbjct 3256779 TTTCAGCGGAGAAGTCCAGATCCCTGAGG-CTCGTTGCTTCTACGGTTTCCAGATCATGA 3256721 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 | || ||| | ||| | || | |||||| || ||||||| ||||| Sbjct 3256720 TCGAAAACATTCACGCCGAGACTTACTCTCTGCTCATTGACACATACAT 3256672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058477467280