Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 179 5e-40 >seq3 Length=4187442 Score = 179 bits (198), Expect = 5e-40 Identities = 591/906 (65%), Gaps = 26/906 (3%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || |||||||| || | |||| |||| ||||| ||| | || || | | | | Sbjct 1408295 TCAAACTCGTCGCCATAGACATCTGCCAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTC 1408354 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || || | ||| || || ||||| || || || || |||||||||| ||| || Sbjct 1408355 CAATCACCATTGGCCTCGACACGCTTCATGAATAGGTCGGGGGTCCAAAGAGC-ATAGAA 1408413 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 || || | || ||| |||||| ||||| ||||| || || | |||| | | Sbjct 1408414 CAGGTCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 1408473 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 || || | ||||| || || | ||| || || | | || || || ||||||||||| Sbjct 1408474 AACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCC 1408533 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||||| | ||||||||||||||| || |||||| | ||| || | ||| ||||| || Sbjct 1408534 TTGATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGA 1408593 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 63494 ||||||||||| ||| || |||| | ||||| || || ||| ||| Sbjct 1408594 CGATCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTG--AGA 1408651 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || || || || || | || || || | || || || || ||||| ||||||||| Sbjct 1408652 CCAATCCCACCAGCAGTCTTTGAAATCATAGCACAGGTCTTCAATGTGTCGTAGATACCC 1408711 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 63610 || || || || || |||||| | || | ||| ||| | | ||| | || Sbjct 1408712 TCGATACTGTCTTCCTTCATGTCGACCAGGA---AGCAAGAAGCTAGCTGA-GGCTGGGG 1408767 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 ||| |||||||| || | ||| || || ||||| || || | || | || | || || Sbjct 1408768 AGTACCCGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTT 1408827 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATT 63728 |||||| || || ||| || |||| | ||| |||||| || || || |||||||| Sbjct 1408828 GTACGTTTCGATGGCTCTCTCAATAT--CGTTGCCATGAATACCGACAGCAACACGCATC 1408885 Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788 | || |||||||| | || | | |||| ||| | || | ||| || || Sbjct 1408886 AGCAAATGCTGAGGACGCTCGGCAACCTTGCCGTTGAGACGCAGAAGGTATGACCGCTCA 1408945 Query 63789 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846 | || || ||||| ||| ||||||| ||||| || || ||||| | ||| | |||| Sbjct 1408946 AGGGTCTTGAAACCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTAGACAATCGCAGAGT 1409003 Query 63847 TGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT--TGAAATAATCGGAGA 63904 |||| | || || ||| | || || || || | || ||| || || || | Sbjct 1409004 TGAGCTCGTCGGCATGTTTCATCACAATCTCGTACGT--TTCTTGTGATATCATAGGCGC 1409061 Query 63905 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 63964 | ||| ||| || || || ||||||| | | | ||| || || ||| | Sbjct 1409062 AGCCTTCTTATTCTTGGGGTTGACATAGTGGTAAAGATCTGAGATGACGAGGGAGAATTG 1409121 Query 63965 tttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATC 64024 || || |||| |||||| || || || ||||| || | ||||| || ||||| || || Sbjct 1409122 CTTCTTGGTTTGCTTGTGGAGGTTCGACACGGCGATACGAGCGGCAAGGATGGCGTAGTC 1409181 Query 64025 CGGATG 64030 || || Sbjct 1409182 TGGGTG 1409187 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || |||||||| ||| ||||||||||| | || || |||||||| || || || Sbjct 3256352 CAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGA 3256411 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 3256412 CCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAG 3256471 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33452 || || || || ||||||||||||| ||| Sbjct 3256472 ATACCCTCGACGGCAGCAAAGGCAACAAG 3256500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946592626480