Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq3 179 5e-40
>seq3
Length=4187442
Score = 179 bits (198), Expect = 5e-40
Identities = 591/906 (65%), Gaps = 26/906 (3%)
Strand=Plus/Plus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
|| |||||||| || | |||| |||| ||||| ||| | || || | | | |
Sbjct 1408295 TCAAACTCGTCGCCATAGACATCTGCCAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTC 1408354
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256
|| || || | ||| || || ||||| || || || || |||||||||| ||| ||
Sbjct 1408355 CAATCACCATTGGCCTCGACACGCTTCATGAATAGGTCGGGGGTCCAAAGAGC-ATAGAA 1408413
Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316
|| || | || ||| |||||| ||||| ||||| || || | |||| | |
Sbjct 1408414 CAGGTCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 1408473
Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376
|| || | ||||| || || | ||| || || | | || || || |||||||||||
Sbjct 1408474 AACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCC 1408533
Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436
||||| | ||||||||||||||| || |||||| | ||| || | ||| ||||| ||
Sbjct 1408534 TTGATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGA 1408593
Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 63494
||||||||||| ||| || |||| | ||||| || || ||| |||
Sbjct 1408594 CGATCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTG--AGA 1408651
Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554
|| || || || || | || || || | || || || || ||||| |||||||||
Sbjct 1408652 CCAATCCCACCAGCAGTCTTTGAAATCATAGCACAGGTCTTCAATGTGTCGTAGATACCC 1408711
Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 63610
|| || || || || |||||| | || | ||| ||| | | ||| | ||
Sbjct 1408712 TCGATACTGTCTTCCTTCATGTCGACCAGGA---AGCAAGAAGCTAGCTGA-GGCTGGGG 1408767
Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670
||| |||||||| || | ||| || || ||||| || || | || | || | || ||
Sbjct 1408768 AGTACCCGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTT 1408827
Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATT 63728
|||||| || || ||| || |||| | ||| |||||| || || || ||||||||
Sbjct 1408828 GTACGTTTCGATGGCTCTCTCAATAT--CGTTGCCATGAATACCGACAGCAACACGCATC 1408885
Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788
| || |||||||| | || | | |||| ||| | || | ||| || ||
Sbjct 1408886 AGCAAATGCTGAGGACGCTCGGCAACCTTGCCGTTGAGACGCAGAAGGTATGACCGCTCA 1408945
Query 63789 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846
| || || ||||| ||| ||||||| ||||| || || ||||| | ||| | ||||
Sbjct 1408946 AGGGTCTTGAAACCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTAGACAATCGCAGAGT 1409003
Query 63847 TGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT--TGAAATAATCGGAGA 63904
|||| | || || ||| | || || || || | || ||| || || || |
Sbjct 1409004 TGAGCTCGTCGGCATGTTTCATCACAATCTCGTACGT--TTCTTGTGATATCATAGGCGC 1409061
Query 63905 ATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 63964
| ||| ||| || || || ||||||| | | | ||| || || ||| |
Sbjct 1409062 AGCCTTCTTATTCTTGGGGTTGACATAGTGGTAAAGATCTGAGATGACGAGGGAGAATTG 1409121
Query 63965 tttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATC 64024
|| || |||| |||||| || || || ||||| || | ||||| || ||||| || ||
Sbjct 1409122 CTTCTTGGTTTGCTTGTGGAGGTTCGACACGGCGATACGAGCGGCAAGGATGGCGTAGTC 1409181
Query 64025 CGGATG 64030
|| ||
Sbjct 1409182 TGGGTG 1409187
Score = 120 bits (132), Expect = 4e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| |||||||| ||| ||||||||||| | || || |||||||| || || ||
Sbjct 3256352 CAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGA 3256411
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|||||||| || |||||||| || ||||| || ||||| || || || ||||| ||||||
Sbjct 3256412 CCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAG 3256471
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAG 33452
|| || || || ||||||||||||| |||
Sbjct 3256472 ATACCCTCGACGGCAGCAAAGGCAACAAG 3256500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946592626480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |