Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01-
07] 78 sequences; 41,102,685 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq60 140 2e-28
seq3 89.7 3e-13
seq30 86.0 4e-12
>seq60
Length=3881
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 78 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 137
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 138 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 172
>seq3
Length=4187442
Score = 89.7 bits (98), Expect = 3e-13
Identities = 73/89 (82%), Gaps = 5/89 (6%)
Strand=Plus/Plus
Query 25903 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTT 25957
|||||||| | ||||||||||||||||||||||||||||| | |||||||||
Sbjct 1295934 AGCCCGTTTTCCCAGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGCGAATCTCGTT 1295993
Query 25958 AATCCTTTCATGCGCGTCACTAATTAGAT 25986
|||| ||||||||||||||||| ||||
Sbjct 1295994 AATCAACTCATGCGCGTCACTAATGAGAT 1296022
>seq30
Length=162096
Score = 86.0 bits (94), Expect = 4e-12
Identities = 73/90 (81%), Gaps = 5/90 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| ||| | ||||||||||| |||||||||||||||||| || ||||||||
Sbjct 54251 AAGCCTGTTTTCCCGGCTGTGGTTTAGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 54192
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGAT 25986
||||| || |||||||||||||| ||||
Sbjct 54191 TAATCAACTCTTGCGCGTCACTAATGAGAT 54162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946881590818
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |