Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20calidoustus_20[genbank_20GCA_5F001511075.1_202016-01- 07] 78 sequences; 41,102,685 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 174 2e-38 >seq3 Length=4187442 Score = 174 bits (192), Expect = 2e-38 Identities = 590/906 (65%), Gaps = 26/906 (3%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || |||||||| || | |||| ||| ||||| ||| | || || | | | | Sbjct 1408295 TCAAACTCGTCGCCATAGACATCTGCCAAGCCAGGGGCTTCGTTAGGGCAGAAGAGGGTC 1408354 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || || || | ||| || || ||||| || || || || |||||||||| ||| || Sbjct 1408355 CAATCACCATTGGCCTCGACACGCTTCATGAATAGGTCGGGGGTCCAAAGAGC-ATAGAA 1408413 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 || || | || ||| |||||| ||||| ||||| || || | |||| | | Sbjct 1408414 CAGGTCACGGGCTCTCACTTCCTCCTTTCCGTGGTTCTTGCGCAGGTCCAAGAACTCGAA 1408473 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 || || | ||||| || || | ||| || || | | || || || ||||||||||| Sbjct 1408474 AACGTCGGCGTGCCAGGGCTCAAGGTAGATAGCAAAGGCACCCGGACGCTTGTTTCCTCC 1408533 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||||| | ||||||||||||||| || |||||| | ||| || | ||| || ||||| Sbjct 1408534 TTGATCAACGTATCTAGCGGTGTTGTTGAAAACTCGAAGCATGGGGAGAATTCCGTTGGA 1408593 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGA 63349 | |||||||| || ||| || |||| | ||||| || || ||| ||| Sbjct 1408594 CGATCCATTGGTACCACTGATGTAAGATCCAGTAGCACGGATGCGGTGAACGTTG--AGA 1408651 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || || || || || | || || || | || || || || || || ||||| ||| Sbjct 1408652 CCAATCCCACCAGCAGTCTTTGAAATCATAGCACAGGTCTTCAATGTGTCGTAGATACCC 1408711 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 63465 || ||||| || ||| |||||| | || | ||| ||| | | ||| | || Sbjct 1408712 TCGATACTGTCTTCCTTCATGTCGACCAGGA---AGCAAGAAGCTAGCTGA-GGCTGGGG 1408767 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 ||| |||||||| || | ||| || || ||||| || || | || | || | || || Sbjct 1408768 AGTACCCGCATTGAACAGGGTCGGGGAGGCGTGTGTGAAGAACTTCTGGGACATCAGGTT 1408827 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATT 63583 |||||| || || ||| || |||| | ||| |||||| || || || |||||||| Sbjct 1408828 GTACGTTTCGATGGCTCTCTCAATAT--CGTTGCCATGAATACCGACAGCAACACGCATC 1408885 Query 63584 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63643 | || |||||||| | || | | |||| ||| | || | ||| || || Sbjct 1408886 AGCAAATGCTGAGGACGCTCGGCAACCTTGCCGTTGAGACGCAGAAGGTATGACCGCTCA 1408945 Query 63644 AAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701 | || || ||||| ||| ||||||| ||||| || || ||||| | ||| | |||| Sbjct 1408946 AGGGTCTTGAAACCGAAAAAGTTGTAGTTGAAA--TCCCGGTCGTAGACAATCGCAGAGT 1409003 Query 63702 TGAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACT--TGAAATAATAGGAAA 63759 |||| | || || ||| | || | || || | || ||| || ||||| Sbjct 1409004 TGAGCTCGTCGGCATGTTTCATCACAATCTCGTACGT--TTCTTGTGATATCATAGGCGC 1409061 Query 63760 ATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAG 63819 | ||| ||| || || |||||||||| | | | ||| || || ||| | Sbjct 1409062 AGCCTTCTTATTCTTGGGGTTGACATAGTGGTAAAGATCTGAGATGACGAGGGAGAATTG 1409121 Query 63820 tttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATC 63879 || || |||| ||||| || || || ||||| || | |||||| || ||||| || || Sbjct 1409122 CTTCTTGGTTTGCTTGTGGAGGTTCGACACGGCGATACGAGCGGCAAGGATGGCGTAGTC 1409181 Query 63880 CGGATG 63885 || || Sbjct 1409182 TGGGTG 1409187 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || |||||||| ||| ||||||||||| | || | |||||||| || || || Sbjct 3256352 CAGGCGAAATCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGA 3256411 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || |||||||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct 3256412 CCGGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAACGAGCCAGAGAAGAAG 3256471 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAG 32809 || || || || || |||||||||| ||| Sbjct 3256472 ATACCCTCGACGGCAGCAAAGGCAACAAG 3256500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631382208800